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  5. Solyc06g070900.3.1

Solyc06g070900.3.1


Description : transcription factor (TCP)


Gene families : OG0000415 (Archaeplastida) Phylogenetic Tree(s): OG0000415_tree ,
OG_05_0000215 (LandPlants) Phylogenetic Tree(s): OG_05_0000215_tree ,
OG_06_0000299 (SeedPlants) Phylogenetic Tree(s): OG_06_0000299_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g070900.3.1
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
AT1G58100 No alias TCP family transcription factor 0.03 Archaeplastida
GSVIVT01008023001 No alias RNA biosynthesis.transcriptional activation.TCP... 0.03 Archaeplastida
GSVIVT01020011001 No alias RNA biosynthesis.transcriptional activation.TCP... 0.04 Archaeplastida
LOC_Os04g44440.1 No alias transcription factor (TCP) 0.04 Archaeplastida
LOC_Os06g12230.1 No alias transcription factor (TCP) 0.03 Archaeplastida
LOC_Os08g43160.1 No alias transcription factor (TCP) 0.06 Archaeplastida
Zm00001e015209_P001 No alias transcription factor (TCP). CHE circadian clock repression factor 0.05 Archaeplastida
Zm00001e016271_P001 No alias transcription factor (TCP). CHE circadian clock repression factor 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP Neighborhood
MF GO:0004185 serine-type carboxypeptidase activity IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
MF GO:0008131 primary amine oxidase activity IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
MF GO:0008238 exopeptidase activity IEP Neighborhood
BP GO:0009308 amine metabolic process IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Neighborhood
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Neighborhood
MF GO:0048038 quinone binding IEP Neighborhood
MF GO:0070008 serine-type exopeptidase activity IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR017887 TF_TCP_subgr 94 265
No external refs found!