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  5. Solyc06g072360.3.1

Solyc06g072360.3.1


Description : C2H2 zinc finger transcription factor


Gene families : OG0000200 (Archaeplastida) Phylogenetic Tree(s): OG0000200_tree ,
OG_05_0000106 (LandPlants) Phylogenetic Tree(s): OG_05_0000106_tree ,
OG_06_0000058 (SeedPlants) Phylogenetic Tree(s): OG_06_0000058_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g072360.3.1
Cluster HCCA: Cluster_64

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00204520 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
AT5G03150 JKD C2H2-like zinc finger protein 0.05 Archaeplastida
GSVIVT01010283001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
GSVIVT01010961001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
GSVIVT01031112001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 Archaeplastida
GSVIVT01035391001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
LOC_Os01g14010.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
LOC_Os03g13400.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
LOC_Os09g27650.2 No alias C2H2 zinc finger transcription factor 0.06 Archaeplastida
MA_26324g0010 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Mp1g15660.1 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Pp3c5_20980V3.1 No alias C2H2-like zinc finger protein 0.02 Archaeplastida
Solyc07g053570.4.1 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Zm00001e000780_P001 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Zm00001e000980_P002 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Zm00001e010628_P002 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Zm00001e025973_P001 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Zm00001e034898_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e035365_P003 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0002682 regulation of immune system process IEP Neighborhood
BP GO:0002831 regulation of response to biotic stimulus IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0009733 response to auxin IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
BP GO:0010112 regulation of systemic acquired resistance IEP Neighborhood
MF GO:0016840 carbon-nitrogen lyase activity IEP Neighborhood
MF GO:0016843 amine-lyase activity IEP Neighborhood
MF GO:0016844 strictosidine synthase activity IEP Neighborhood
BP GO:0031347 regulation of defense response IEP Neighborhood
BP GO:0032101 regulation of response to external stimulus IEP Neighborhood
BP GO:0040008 regulation of growth IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
BP GO:0043900 regulation of multi-organism process IEP Neighborhood
BP GO:0045088 regulation of innate immune response IEP Neighborhood
BP GO:0045927 positive regulation of growth IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
BP GO:0048583 regulation of response to stimulus IEP Neighborhood
BP GO:0050776 regulation of immune response IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0080134 regulation of response to stress IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!