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  5. AMTR_s00027p00086650

AMTR_s00027p00086650 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00027.26

No description available


Gene families : OG0000382 (Archaeplastida) Phylogenetic Tree(s): OG0000382_tree ,
OG_05_0000235 (LandPlants) Phylogenetic Tree(s): OG_05_0000235_tree ,
OG_06_0000343 (SeedPlants) Phylogenetic Tree(s): OG_06_0000343_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00027p00086650
Cluster HCCA: Cluster_90

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00073560 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
GSVIVT01019650001 No alias No description available 0.02 Archaeplastida
GSVIVT01031263001 No alias No description available 0.01 Archaeplastida
Gb_40920 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os01g46390.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os05g49790.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os06g34790.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os07g02690.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os07g02850.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os07g02880.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os07g02900.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os07g02920.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os07g02940.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os10g37400.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os11g38210.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os11g38220.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os11g38240.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os12g37650.1 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_10435514g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_10435514g0020 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_10435514g0030 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_120712g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_128814g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_304675g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_440140g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_500179g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_5629g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_73238g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_8097895g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_920567g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_924621g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_9395g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
Mp1g00970.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp7g02720.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc01g100770.2.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e004354_P001 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e018189_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e020996_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e032489_P001 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003989 acetyl-CoA carboxylase activity IEP Neighborhood
MF GO:0004743 pyruvate kinase activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
CC GO:0005811 lipid droplet IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
CC GO:0009317 acetyl-CoA carboxylase complex IEP Neighborhood
CC GO:0012511 monolayer-surrounded lipid storage body IEP Neighborhood
MF GO:0016421 CoA carboxylase activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Neighborhood
MF GO:0016872 intramolecular lyase activity IEP Neighborhood
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0030955 potassium ion binding IEP Neighborhood
MF GO:0030976 thiamine pyrophosphate binding IEP Neighborhood
MF GO:0031420 alkali metal ion binding IEP Neighborhood
BP GO:0032787 monocarboxylic acid metabolic process IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP Neighborhood
MF GO:0045735 nutrient reservoir activity IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0051920 peroxiredoxin activity IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
MF GO:1901681 sulfur compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR007493 DUF538 27 139
No external refs found!