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  5. AMTR_s00027p00139980

AMTR_s00027p00139980 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00027.39

No description available


Gene families : OG0001524 (Archaeplastida) Phylogenetic Tree(s): OG0001524_tree ,
OG_05_0000987 (LandPlants) Phylogenetic Tree(s): OG_05_0000987_tree ,
OG_06_0000497 (SeedPlants) Phylogenetic Tree(s): OG_06_0000497_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00027p00139980
Cluster HCCA: Cluster_88

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00270660 No alias No description available 0.04 Archaeplastida
AMTR_s00006p00179450 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00008p00266590 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00026p00072130 evm_27.TU.AmTr_v1... No description available 0.05 Archaeplastida
AMTR_s00026p00103840 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00028p00185730 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00035p00171800 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00043p00200800 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00047p00225800 evm_27.TU.AmTr_v1... No description available 0.06 Archaeplastida
AMTR_s00054p00147360 evm_27.TU.AmTr_v1... No description available 0.05 Archaeplastida
AMTR_s00100p00118360 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00100p00153140 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00132p00058170 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00151p00045250 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005375 copper ion transmembrane transporter activity IEP Neighborhood
BP GO:0006825 copper ion transport IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0017048 Rho GTPase binding IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
BP GO:0035434 copper ion transmembrane transport IEP Neighborhood
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!