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  5. Solyc06g075340.4.1

Solyc06g075340.4.1


Description : large subunit of carbamoyl phosphate synthetase heterodimer. large subunit of carbamoyl phosphate synthetase heterodimer


Gene families : OG0003051 (Archaeplastida) Phylogenetic Tree(s): OG0003051_tree ,
OG_05_0004347 (LandPlants) Phylogenetic Tree(s): OG_05_0004347_tree ,
OG_06_0005710 (SeedPlants) Phylogenetic Tree(s): OG_06_0005710_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g075340.4.1
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00226690 evm_27.TU.AmTr_v1... Nucleotide metabolism.pyrimidines.ribonucleotide... 0.03 Archaeplastida
AT1G29900 CARB carbamoyl phosphate synthetase B 0.05 Archaeplastida
LOC_Os01g38970.1 No alias large subunit of carbamoyl phosphate synthetase... 0.04 Archaeplastida
MA_10329277g0010 No alias Carbamoyl-phosphate synthase large chain, chloroplastic... 0.03 Archaeplastida
Mp4g19600.1 No alias large subunit of carbamoyl phosphate synthetase... 0.03 Archaeplastida
Pp3c2_19430V3.1 No alias carbamoyl phosphate synthetase B 0.06 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003916 DNA topoisomerase activity IEP Neighborhood
MF GO:0004637 phosphoribosylamine-glycine ligase activity IEP Neighborhood
CC GO:0005694 chromosome IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006144 purine nucleobase metabolic process IEP Neighborhood
BP GO:0006265 DNA topological change IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0006996 organelle organization IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
BP GO:0009112 nucleobase metabolic process IEP Neighborhood
BP GO:0009113 purine nucleobase biosynthetic process IEP Neighborhood
BP GO:0009116 nucleoside metabolic process IEP Neighborhood
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Neighborhood
CC GO:0019867 outer membrane IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0042440 pigment metabolic process IEP Neighborhood
BP GO:0044281 small molecule metabolic process IEP Neighborhood
BP GO:0046112 nucleobase biosynthetic process IEP Neighborhood
BP GO:0046148 pigment biosynthetic process IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
MF GO:0050661 NADP binding IEP Neighborhood
BP GO:0051276 chromosome organization IEP Neighborhood
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Neighborhood
BP GO:0071103 DNA conformation change IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
BP GO:1901657 glycosyl compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR011607 MGS-like_dom 1063 1148
IPR005479 CbamoylP_synth_lsu-like_ATP-bd 219 426
IPR005479 CbamoylP_synth_lsu-like_ATP-bd 777 979
IPR005480 CarbamoylP_synth_lsu_oligo 519 638
No external refs found!