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  5. Solyc06g075567.1.1

Solyc06g075567.1.1


Description : transcription factor (WOX)


Gene families : OG0000425 (Archaeplastida) Phylogenetic Tree(s): OG0000425_tree ,
OG_05_0000212 (LandPlants) Phylogenetic Tree(s): OG_05_0000212_tree ,
OG_06_0000309 (SeedPlants) Phylogenetic Tree(s): OG_06_0000309_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g075567.1.1
Cluster HCCA: Cluster_160

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00122680 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.03 Archaeplastida
AMTR_s00051p00020930 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.04 Archaeplastida
AMTR_s00405p00009920 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.04 Archaeplastida
AT2G01500 PFS2, HOS9, WOX6 Homeodomain-like superfamily protein 0.06 Archaeplastida
AT2G17950 WUS, PGA6, WUS1 Homeodomain-like superfamily protein 0.03 Archaeplastida
AT2G28610 WOX3, PRS1, PRS Homeodomain-like superfamily protein 0.05 Archaeplastida
AT2G33880 STIP, HB-3, WOX9 homeobox-3 0.03 Archaeplastida
AT3G11260 WOX5 WUSCHEL related homeobox 5 0.03 Archaeplastida
AT3G18010 WOX1 WUSCHEL related homeobox 1 0.05 Archaeplastida
AT5G05770 WOX7 WUSCHEL related homeobox 7 0.03 Archaeplastida
AT5G46010 No alias Homeodomain-like superfamily protein 0.04 Archaeplastida
GSVIVT01009453001 No alias RNA biosynthesis.transcriptional activation.HB... 0.04 Archaeplastida
GSVIVT01016360001 No alias RNA biosynthesis.transcriptional activation.HB... 0.05 Archaeplastida
GSVIVT01018787001 No alias RNA biosynthesis.transcriptional activation.HB... 0.03 Archaeplastida
GSVIVT01021144001 No alias RNA biosynthesis.transcriptional activation.HB... 0.03 Archaeplastida
GSVIVT01025075001 No alias RNA biosynthesis.transcriptional activation.HB... 0.07 Archaeplastida
Gb_01484 No alias transcription factor (WOX) 0.05 Archaeplastida
Gb_12294 No alias transcription factor (WOX) 0.02 Archaeplastida
Gb_12565 No alias transcription factor (WOX) 0.02 Archaeplastida
Gb_27283 No alias transcription factor (WOX) 0.03 Archaeplastida
Gb_29958 No alias transcription factor (WOX) 0.04 Archaeplastida
LOC_Os01g62310.1 No alias transcription factor (WOX) 0.02 Archaeplastida
LOC_Os03g20910.1 No alias transcription factor (WOX) 0.04 Archaeplastida
LOC_Os05g02730.1 No alias transcription factor (WOX) 0.03 Archaeplastida
LOC_Os05g48990.1 No alias transcription factor (WOX) 0.05 Archaeplastida
LOC_Os07g48560.1 No alias transcription factor (WOX) 0.05 Archaeplastida
LOC_Os08g14400.1 No alias transcription factor (WOX) 0.06 Archaeplastida
MA_1910g0010 No alias transcription factor (WOX) 0.04 Archaeplastida
MA_42637g0010 No alias transcription factor (WOX) 0.02 Archaeplastida
MA_8832398g0010 No alias transcription factor (WOX) 0.04 Archaeplastida
MA_921642g0010 No alias transcription factor (WOX) 0.02 Archaeplastida
Solyc02g083950.3.1 No alias transcription factor (WOX) 0.05 Archaeplastida
Solyc06g072890.3.1 No alias transcription factor (WOX) 0.03 Archaeplastida
Zm00001e006644_P002 No alias transcription factor (WOX) 0.05 Archaeplastida
Zm00001e009121_P001 No alias transcription factor (WOX) 0.06 Archaeplastida
Zm00001e024169_P001 No alias transcription factor (WOX) 0.04 Archaeplastida
Zm00001e029534_P001 No alias transcription factor (WOX) 0.07 Archaeplastida
Zm00001e032433_P003 No alias transcription factor (WOX) 0.05 Archaeplastida
Zm00001e035891_P001 No alias transcription factor (WOX) 0.03 Archaeplastida
Zm00001e038272_P001 No alias transcription factor (WOX) 0.02 Archaeplastida
Zm00001e040096_P001 No alias transcription factor (WOX) 0.04 Archaeplastida
Zm00001e041785_P001 No alias transcription factor (WOX) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
BP GO:0006812 cation transport IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
MF GO:0015035 protein disulfide oxidoreductase activity IEP Neighborhood
MF GO:0015036 disulfide oxidoreductase activity IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001356 Homeobox_dom 3 63
No external refs found!