- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : Laccase-3 OS=Arabidopsis thaliana (sp|q56yt0|lac3_arath : 234.0) & Enzyme classification.EC_1 oxidoreductases.EC_1.10 oxidoreductase acting on diphenol or related substance as donor(50.1.10 : 112.4)
Gene families : OG0005069 (Archaeplastida) Phylogenetic Tree(s): OG0005069_tree ,
OG_05_0003281 (LandPlants) Phylogenetic Tree(s): OG_05_0003281_tree ,
OG_06_0001949 (SeedPlants) Phylogenetic Tree(s): OG_06_0001949_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Solyc06g082250.1.1 | |
| Cluster | HCCA: Cluster_225 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| MA_10436564g0020 | No alias | Laccase-12 OS=Arabidopsis thaliana... | 0.07 | Archaeplastida | |
| MA_619076g0010 | No alias | Laccase-12 OS=Arabidopsis thaliana... | 0.06 | Archaeplastida | |
| MA_8371170g0010 | No alias | Laccase-12 OS=Arabidopsis thaliana... | 0.04 | Archaeplastida | |
| Solyc05g052360.2.1 | No alias | Laccase-12 OS=Arabidopsis thaliana... | 0.06 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005507 | copper ion binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000041 | transition metal ion transport | IEP | Neighborhood |
| MF | GO:0003824 | catalytic activity | IEP | Neighborhood |
| MF | GO:0004601 | peroxidase activity | IEP | Neighborhood |
| MF | GO:0005381 | iron ion transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0005509 | calcium ion binding | IEP | Neighborhood |
| BP | GO:0006811 | ion transport | IEP | Neighborhood |
| BP | GO:0006812 | cation transport | IEP | Neighborhood |
| BP | GO:0006826 | iron ion transport | IEP | Neighborhood |
| BP | GO:0006950 | response to stress | IEP | Neighborhood |
| BP | GO:0006979 | response to oxidative stress | IEP | Neighborhood |
| BP | GO:0008150 | biological_process | IEP | Neighborhood |
| BP | GO:0008152 | metabolic process | IEP | Neighborhood |
| MF | GO:0015267 | channel activity | IEP | Neighborhood |
| MF | GO:0016209 | antioxidant activity | IEP | Neighborhood |
| MF | GO:0016491 | oxidoreductase activity | IEP | Neighborhood |
| MF | GO:0016684 | oxidoreductase activity, acting on peroxide as acceptor | IEP | Neighborhood |
| MF | GO:0016740 | transferase activity | IEP | Neighborhood |
| MF | GO:0016757 | transferase activity, transferring glycosyl groups | IEP | Neighborhood |
| MF | GO:0020037 | heme binding | IEP | Neighborhood |
| MF | GO:0022803 | passive transmembrane transporter activity | IEP | Neighborhood |
| BP | GO:0030001 | metal ion transport | IEP | Neighborhood |
| MF | GO:0030976 | thiamine pyrophosphate binding | IEP | Neighborhood |
| BP | GO:0034755 | iron ion transmembrane transport | IEP | Neighborhood |
| MF | GO:0046873 | metal ion transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0046906 | tetrapyrrole binding | IEP | Neighborhood |
| MF | GO:0046915 | transition metal ion transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0048037 | cofactor binding | IEP | Neighborhood |
| MF | GO:0050664 | oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor | IEP | Neighborhood |
| BP | GO:0050896 | response to stimulus | IEP | Neighborhood |
| BP | GO:0055114 | oxidation-reduction process | IEP | Neighborhood |
| MF | GO:1901681 | sulfur compound binding | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR011707 | Cu-oxidase_3 | 31 | 145 |
| No external refs found! |