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  5. Solyc06g082850.4.1

Solyc06g082850.4.1


Description : no hits & (original description: none)


Gene families : OG0017696 (Archaeplastida) Phylogenetic Tree(s): OG0017696_tree ,
OG_05_0017483 (LandPlants) Phylogenetic Tree(s): OG_05_0017483_tree ,
OG_06_0017040 (SeedPlants) Phylogenetic Tree(s): OG_06_0017040_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g082850.4.1
Cluster HCCA: Cluster_120

Target Alias Description ECC score Gene Family Method Actions
AT5G01910 No alias unknown protein; Has 66 Blast hits to 66 proteins in 27... 0.13 Archaeplastida
GSVIVT01030170001 No alias No description available 0.09 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000444 MIS12/MIND type complex IEP Neighborhood
CC GO:0000786 nucleosome IEP Neighborhood
CC GO:0000818 nuclear MIS12/MIND complex IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
BP GO:0006334 nucleosome assembly IEP Neighborhood
BP GO:0007062 sister chromatid cohesion IEP Neighborhood
BP GO:0007064 mitotic sister chromatid cohesion IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0017048 Rho GTPase binding IEP Neighborhood
BP GO:0022402 cell cycle process IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
CC GO:0031390 Ctf18 RFC-like complex IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
CC GO:0032993 protein-DNA complex IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0034728 nucleosome organization IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044454 nuclear chromosome part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
CC GO:0044815 DNA packaging complex IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:0051276 chromosome organization IEP Neighborhood
BP GO:0065004 protein-DNA complex assembly IEP Neighborhood
BP GO:0071824 protein-DNA complex subunit organization IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
BP GO:1903047 mitotic cell cycle process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!