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  5. Solyc06g083590.4.1

Solyc06g083590.4.1


Description : transcription factor (LAV-ABI3)


Gene families : OG0001110 (Archaeplastida) Phylogenetic Tree(s): OG0001110_tree ,
OG_05_0000678 (LandPlants) Phylogenetic Tree(s): OG_05_0000678_tree ,
OG_06_0000807 (SeedPlants) Phylogenetic Tree(s): OG_06_0000807_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g083590.4.1
Cluster HCCA: Cluster_192

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00160p00070370 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.B3... 0.03 Archaeplastida
AT1G28300 LEC2 AP2/B3-like transcriptional factor family protein 0.05 Archaeplastida
AT3G26790 FUS3 AP2/B3-like transcriptional factor family protein 0.06 Archaeplastida
GSVIVT01028540001 No alias RNA biosynthesis.transcriptional activation.B3... 0.05 Archaeplastida
Gb_01768 No alias transcription factor (LAV-ABI3) 0.04 Archaeplastida
LOC_Os01g68370.1 No alias transcription factor (LAV-ABI3) 0.04 Archaeplastida
MA_66505g0020 No alias transcription factor (LAV-ABI3) 0.02 Archaeplastida
Mp2g08260.1 No alias transcription factor (LAV-ABI3) 0.03 Archaeplastida
Pp3c18_16640V3.1 No alias AP2/B3-like transcriptional factor family protein 0.03 Archaeplastida
Pp3c9_20090V3.1 No alias AP2/B3-like transcriptional factor family protein 0.03 Archaeplastida
Zm00001e018872_P002 No alias transcription factor (LAV-ABI3) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004476 mannose-6-phosphate isomerase activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0015298 solute:cation antiporter activity IEP Neighborhood
MF GO:0015299 solute:proton antiporter activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016860 intramolecular oxidoreductase activity IEP Neighborhood
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0030151 molybdenum ion binding IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR003340 B3_DNA-bd 446 541
No external refs found!