Solyc06g083760.3.1

Description : class V/Su(var) histone methyltransferase component of histone lysine methylation/demethylation

Gene families : OG0002157 (Archaeplastida) Phylogenetic Tree(s): OG0002157_tree ,
OG_05_0001573 (LandPlants) Phylogenetic Tree(s): OG_05_0001573_tree ,
OG_06_0002209 (SeedPlants) Phylogenetic Tree(s): OG_06_0002209_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc06g083760.3.1
Cluster	HCCA: Cluster_35

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00039p00237910	evm_27.TU.AmTr_v1...	Chromatin organisation.histone modifications.histone...	0.03	Archaeplastida
AT1G04050	SDG13, SUVR1	homolog of SU(var)3-9 1	0.03	Archaeplastida
MA_106792g0010	No alias	class V/Su(var) histone methyltransferase component of...	0.03	Archaeplastida
Smo85776	No alias	Chromatin organisation.histone modifications.histone...	0.02	Archaeplastida
Zm00001e007509_P001	No alias	no hits & (original description: none)	0.03	Archaeplastida
Zm00001e022012_P001	No alias	class V/Su(var) histone methyltransferase component of...	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	Interproscan
BP	GO:0006325	chromatin organization	None	Extended
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006479	protein methylation	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008168	methyltransferase activity	None	Extended
MF	GO:0008170	N-methyltransferase activity	None	Extended
BP	GO:0008213	protein alkylation	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0008276	protein methyltransferase activity	None	Extended
MF	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0016278	lysine N-methyltransferase activity	None	Extended
MF	GO:0016279	protein-lysine N-methyltransferase activity	None	Extended
BP	GO:0016569	covalent chromatin modification	None	Extended
BP	GO:0016570	histone modification	None	Extended
BP	GO:0016571	histone methylation	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016741	transferase activity, transferring one-carbon groups	None	Extended
BP	GO:0018022	peptidyl-lysine methylation	None	Extended
MF	GO:0018024	histone-lysine N-methyltransferase activity	IEA	Interproscan
BP	GO:0018193	peptidyl-amino acid modification	None	Extended
BP	GO:0018205	peptidyl-lysine modification	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0032259	methylation	None	Extended
BP	GO:0034968	histone lysine methylation	IEA	Interproscan
BP	GO:0036211	protein modification process	None	Extended
MF	GO:0042054	histone methyltransferase activity	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043414	macromolecule methylation	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000159	protein phosphatase type 2A complex	IEP	Neighborhood
BP	GO:0000723	telomere maintenance	IEP	Neighborhood
CC	GO:0000781	chromosome, telomeric region	IEP	Neighborhood
CC	GO:0000784	nuclear chromosome, telomeric region	IEP	Neighborhood
MF	GO:0003676	nucleic acid binding	IEP	Neighborhood
MF	GO:0003677	DNA binding	IEP	Neighborhood
MF	GO:0003682	chromatin binding	IEP	Neighborhood
MF	GO:0003689	DNA clamp loader activity	IEP	Neighborhood
MF	GO:0003697	single-stranded DNA binding	IEP	Neighborhood
MF	GO:0003916	DNA topoisomerase activity	IEP	Neighborhood
CC	GO:0005663	DNA replication factor C complex	IEP	Neighborhood
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	Neighborhood
BP	GO:0006259	DNA metabolic process	IEP	Neighborhood
BP	GO:0006260	DNA replication	IEP	Neighborhood
BP	GO:0006265	DNA topological change	IEP	Neighborhood
BP	GO:0006284	base-excision repair	IEP	Neighborhood
BP	GO:0006338	chromatin remodeling	IEP	Neighborhood
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	Neighborhood
BP	GO:0006996	organelle organization	IEP	Neighborhood
MF	GO:0008092	cytoskeletal protein binding	IEP	Neighborhood
MF	GO:0008094	DNA-dependent ATPase activity	IEP	Neighborhood
CC	GO:0008287	protein serine/threonine phosphatase complex	IEP	Neighborhood
MF	GO:0015631	tubulin binding	IEP	Neighborhood
MF	GO:0016462	pyrophosphatase activity	IEP	Neighborhood
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	Neighborhood
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	Neighborhood
MF	GO:0016853	isomerase activity	IEP	Neighborhood
MF	GO:0017111	nucleoside-triphosphatase activity	IEP	Neighborhood
MF	GO:0019208	phosphatase regulator activity	IEP	Neighborhood
MF	GO:0019888	protein phosphatase regulator activity	IEP	Neighborhood
MF	GO:0031491	nucleosome binding	IEP	Neighborhood
BP	GO:0032200	telomere organization	IEP	Neighborhood
MF	GO:0033170	protein-DNA loading ATPase activity	IEP	Neighborhood
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	Neighborhood
MF	GO:0042162	telomeric DNA binding	IEP	Neighborhood
BP	GO:0042592	homeostatic process	IEP	Neighborhood
MF	GO:0043015	gamma-tubulin binding	IEP	Neighborhood
BP	GO:0043044	ATP-dependent chromatin remodeling	IEP	Neighborhood
MF	GO:0043047	single-stranded telomeric DNA binding	IEP	Neighborhood
CC	GO:0044427	chromosomal part	IEP	Neighborhood
CC	GO:0044454	nuclear chromosome part	IEP	Neighborhood
MF	GO:0044877	protein-containing complex binding	IEP	Neighborhood
BP	GO:0046483	heterocycle metabolic process	IEP	Neighborhood
BP	GO:0051276	chromosome organization	IEP	Neighborhood
BP	GO:0060249	anatomical structure homeostasis	IEP	Neighborhood
BP	GO:0071103	DNA conformation change	IEP	Neighborhood
BP	GO:0090304	nucleic acid metabolic process	IEP	Neighborhood
MF	GO:0097159	organic cyclic compound binding	IEP	Neighborhood
CC	GO:0098687	chromosomal region	IEP	Neighborhood
MF	GO:0098847	sequence-specific single stranded DNA binding	IEP	Neighborhood
BP	GO:1901360	organic cyclic compound metabolic process	IEP	Neighborhood
MF	GO:1901363	heterocyclic compound binding	IEP	Neighborhood
CC	GO:1903293	phosphatase complex	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR018848	WIYLD_domain	6	59
IPR001214	SET_dom	702	824
IPR007728	Pre-SET_dom	535	682

External Links

No external refs found!

Solyc06g083760.3.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation