Description : component RPL39 of LSU proteome component
Gene families : OG0003973 (Archaeplastida) Phylogenetic Tree(s): OG0003973_tree ,
OG_05_0003049 (LandPlants) Phylogenetic Tree(s): OG_05_0003049_tree ,
OG_06_0003583 (SeedPlants) Phylogenetic Tree(s): OG_06_0003583_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Solyc07g005050.3.1 | |
Cluster | HCCA: Cluster_155 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT2G25210 | No alias | Ribosomal protein L39 family protein | 0.12 | Archaeplastida | |
AT3G02190 | No alias | Ribosomal protein L39 family protein | 0.08 | Archaeplastida | |
AT4G31985 | No alias | Ribosomal protein L39 family protein | 0.08 | Archaeplastida | |
GSVIVT01035913001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.04 | Archaeplastida | |
Gb_24546 | No alias | component RPL39 of LSU proteome component | 0.03 | Archaeplastida | |
LOC_Os02g55370.1 | No alias | component RPL39 of LSU proteome component | 0.07 | Archaeplastida | |
LOC_Os06g08320.1 | No alias | component RPL39 of LSU proteome component | 0.02 | Archaeplastida | |
MA_92282g0010 | No alias | component RPL39 of LSU proteome component | 0.02 | Archaeplastida | |
Mp1g26960.1 | No alias | component RPL39 of LSU proteome component | 0.13 | Archaeplastida | |
Pp3c15_14860V3.1 | No alias | Ribosomal protein L39 family protein | 0.03 | Archaeplastida | |
Pp3c9_18780V3.1 | No alias | Ribosomal protein L39 family protein | 0.05 | Archaeplastida | |
Zm00001e023685_P001 | No alias | component RPL39 of LSU proteome component | 0.04 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
CC | GO:0005840 | ribosome | IEA | Interproscan |
BP | GO:0006412 | translation | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000276 | mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) | IEP | Neighborhood |
CC | GO:0000930 | gamma-tubulin complex | IEP | Neighborhood |
CC | GO:0000931 | gamma-tubulin large complex | IEP | Neighborhood |
BP | GO:0001522 | pseudouridine synthesis | IEP | Neighborhood |
CC | GO:0005743 | mitochondrial inner membrane | IEP | Neighborhood |
BP | GO:0008104 | protein localization | IEP | Neighborhood |
CC | GO:0008274 | gamma-tubulin ring complex | IEP | Neighborhood |
CC | GO:0019866 | organelle inner membrane | IEP | Neighborhood |
BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Neighborhood |
MF | GO:0030515 | snoRNA binding | IEP | Neighborhood |
BP | GO:0031503 | protein-containing complex localization | IEP | Neighborhood |
BP | GO:0033036 | macromolecule localization | IEP | Neighborhood |
BP | GO:0033566 | gamma-tubulin complex localization | IEP | Neighborhood |
BP | GO:0034613 | cellular protein localization | IEP | Neighborhood |
BP | GO:0034629 | cellular protein-containing complex localization | IEP | Neighborhood |
BP | GO:0042254 | ribosome biogenesis | IEP | Neighborhood |
BP | GO:0044085 | cellular component biogenesis | IEP | Neighborhood |
CC | GO:0044422 | organelle part | IEP | Neighborhood |
CC | GO:0044429 | mitochondrial part | IEP | Neighborhood |
CC | GO:0044430 | cytoskeletal part | IEP | Neighborhood |
CC | GO:0044446 | intracellular organelle part | IEP | Neighborhood |
CC | GO:0044450 | microtubule organizing center part | IEP | Neighborhood |
CC | GO:0044455 | mitochondrial membrane part | IEP | Neighborhood |
CC | GO:0045263 | proton-transporting ATP synthase complex, coupling factor F(o) | IEP | Neighborhood |
BP | GO:0051641 | cellular localization | IEP | Neighborhood |
CC | GO:0070469 | respiratory chain | IEP | Neighborhood |
BP | GO:0070727 | cellular macromolecule localization | IEP | Neighborhood |
CC | GO:0098798 | mitochondrial protein complex | IEP | Neighborhood |
CC | GO:0098800 | inner mitochondrial membrane protein complex | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000077 | Ribosomal_L39 | 9 | 49 |
No external refs found! |