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  5. Solyc07g005600.4.1

Solyc07g005600.4.1


Description : Transmembrane 9 superfamily member 9 OS=Arabidopsis thaliana (sp|q9c5n2|tmn9_arath : 986.0)


Gene families : OG0000955 (Archaeplastida) Phylogenetic Tree(s): OG0000955_tree ,
OG_05_0001007 (LandPlants) Phylogenetic Tree(s): OG_05_0001007_tree ,
OG_06_0001094 (SeedPlants) Phylogenetic Tree(s): OG_06_0001094_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc07g005600.4.1
Cluster HCCA: Cluster_79

Target Alias Description ECC score Gene Family Method Actions
AT1G55130 TMN6, AtTMN6 Endomembrane protein 70 protein family 0.03 Archaeplastida
AT2G24170 No alias Endomembrane protein 70 protein family 0.07 Archaeplastida
AT3G13772 AtTMN7, TMN7 transmembrane nine 7 0.02 Archaeplastida
AT5G10840 No alias Endomembrane protein 70 protein family 0.13 Archaeplastida
Cpa|evm.model.tig00000829.11 No alias Transmembrane 9 superfamily member 7 OS=Arabidopsis thaliana 0.03 Archaeplastida
Cre10.g439850 No alias Transmembrane 9 superfamily member 7 OS=Arabidopsis thaliana 0.11 Archaeplastida
GSVIVT01016851001 No alias Transmembrane 9 superfamily member 7 OS=Arabidopsis thaliana 0.08 Archaeplastida
GSVIVT01035970001 No alias Transmembrane 9 superfamily member 9 OS=Arabidopsis thaliana 0.08 Archaeplastida
Gb_23530 No alias Transmembrane 9 superfamily member 7 OS=Arabidopsis... 0.03 Archaeplastida
Gb_26109 No alias Transmembrane 9 superfamily member 7 OS=Arabidopsis... 0.1 Archaeplastida
LOC_Os06g37160.1 No alias Transmembrane 9 superfamily member 7 OS=Arabidopsis... 0.05 Archaeplastida
LOC_Os09g38530.1 No alias Transmembrane 9 superfamily member 10 OS=Arabidopsis... 0.04 Archaeplastida
MA_10427943g0010 No alias no hits & (original description: none) 0.06 Archaeplastida
MA_177756g0010 No alias Transmembrane 9 superfamily member 7 OS=Arabidopsis... 0.03 Archaeplastida
MA_83018g0010 No alias Transmembrane 9 superfamily member 7 OS=Arabidopsis... 0.08 Archaeplastida
MA_83018g0020 No alias Transmembrane 9 superfamily member 7 OS=Arabidopsis... 0.03 Archaeplastida
Mp4g15200.1 No alias Transmembrane 9 superfamily member 7 OS=Arabidopsis... 0.02 Archaeplastida
Pp3c15_4550V3.1 No alias transmembrane nine 7 0.03 Archaeplastida
Pp3c23_10950V3.1 No alias transmembrane nine 7 0.06 Archaeplastida
Pp3c24_7350V3.1 No alias transmembrane nine 7 0.04 Archaeplastida
Pp3c9_8630V3.1 No alias transmembrane nine 7 0.03 Archaeplastida
Smo165859 No alias Transmembrane 9 superfamily member 7 OS=Arabidopsis thaliana 0.02 Archaeplastida
Zm00001e003963_P001 No alias Transmembrane 9 superfamily member 9 OS=Arabidopsis... 0.04 Archaeplastida
Zm00001e003964_P001 No alias Transmembrane 9 superfamily member 9 OS=Arabidopsis... 0.06 Archaeplastida
Zm00001e034890_P002 No alias Transmembrane 9 superfamily member 9 OS=Arabidopsis... 0.04 Archaeplastida
Zm00001e039875_P001 No alias Transmembrane 9 superfamily member 10 OS=Arabidopsis... 0.2 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Neighborhood
CC GO:0000139 Golgi membrane IEP Neighborhood
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0004470 malic enzyme activity IEP Neighborhood
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005783 endoplasmic reticulum IEP Neighborhood
CC GO:0005789 endoplasmic reticulum membrane IEP Neighborhood
BP GO:0006486 protein glycosylation IEP Neighborhood
BP GO:0006487 protein N-linked glycosylation IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006812 cation transport IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0006904 vesicle docking involved in exocytosis IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0008536 Ran GTPase binding IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Neighborhood
MF GO:0015078 proton transmembrane transporter activity IEP Neighborhood
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP Neighborhood
BP GO:0015672 monovalent inorganic cation transport IEP Neighborhood
BP GO:0015780 nucleotide-sugar transmembrane transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
BP GO:0015931 nucleobase-containing compound transport IEP Neighborhood
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
CC GO:0016459 myosin complex IEP Neighborhood
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Neighborhood
MF GO:0016615 malate dehydrogenase activity IEP Neighborhood
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
BP GO:0018196 peptidyl-asparagine modification IEP Neighborhood
BP GO:0018279 protein N-linked glycosylation via asparagine IEP Neighborhood
BP GO:0022406 membrane docking IEP Neighborhood
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
CC GO:0030118 clathrin coat IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030125 clathrin vesicle coat IEP Neighborhood
CC GO:0030126 COPI vesicle coat IEP Neighborhood
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Neighborhood
CC GO:0030132 clathrin coat of coated pit IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP Neighborhood
CC GO:0033179 proton-transporting V-type ATPase, V0 domain IEP Neighborhood
CC GO:0033180 proton-transporting V-type ATPase, V1 domain IEP Neighborhood
MF GO:0033218 amide binding IEP Neighborhood
BP GO:0034220 ion transmembrane transport IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
BP GO:0043413 macromolecule glycosylation IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044431 Golgi apparatus part IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
BP GO:0048278 vesicle docking IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
MF GO:0051287 NAD binding IEP Neighborhood
BP GO:0051640 organelle localization IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
BP GO:0070085 glycosylation IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP Neighborhood
CC GO:0098588 bounding membrane of organelle IEP Neighborhood
BP GO:0098655 cation transmembrane transport IEP Neighborhood
BP GO:0098660 inorganic ion transmembrane transport IEP Neighborhood
BP GO:0098662 inorganic cation transmembrane transport IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
CC GO:0098797 plasma membrane protein complex IEP Neighborhood
BP GO:0140029 exocytic process IEP Neighborhood
BP GO:0140056 organelle localization by membrane tethering IEP Neighborhood
BP GO:1901264 carbohydrate derivative transport IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Neighborhood
MF GO:1901567 fatty acid derivative binding IEP Neighborhood
MF GO:1901681 sulfur compound binding IEP Neighborhood
BP GO:1902600 proton transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR004240 EMP70 60 597
No external refs found!