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  5. Solyc07g006830.4.1

Solyc07g006830.4.1


Description : Calmodulin-binding protein 60 B OS=Arabidopsis thaliana (sp|q9fkl6|cb60b_arath : 795.0)


Gene families : OG0000559 (Archaeplastida) Phylogenetic Tree(s): OG0000559_tree ,
OG_05_0000828 (LandPlants) Phylogenetic Tree(s): OG_05_0000828_tree ,
OG_06_0001485 (SeedPlants) Phylogenetic Tree(s): OG_06_0001485_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc07g006830.4.1
Cluster HCCA: Cluster_264

Target Alias Description ECC score Gene Family Method Actions
AT2G18750 No alias Calmodulin-binding protein 0.04 Archaeplastida
AT5G57580 No alias Calmodulin-binding protein 0.04 Archaeplastida
AT5G62570 No alias Calmodulin binding protein-like 0.04 Archaeplastida
GSVIVT01003207001 No alias Calmodulin-binding protein 60 C OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01008322001 No alias Protein SAR DEFICIENT 1 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01029152001 No alias Calmodulin-binding protein 60 B OS=Arabidopsis thaliana 0.04 Archaeplastida
LOC_Os02g08120.1 No alias Calmodulin-binding protein 60 B OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os02g35470.1 No alias Calmodulin-binding protein 60 B OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os03g18960.1 No alias Calmodulin-binding protein 60 D OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os04g36660.1 No alias Calmodulin-binding protein 60 B OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os11g44630.1 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_23963g0010 No alias Calmodulin-binding protein 60 B OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_88280g0010 No alias Calmodulin-binding protein 60 B OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc03g113920.4.1 No alias Calmodulin-binding protein 60 A OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e001388_P002 No alias Calmodulin-binding protein 60 D OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e008018_P001 No alias Calmodulin-binding protein 60 C OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e014847_P002 No alias Calmodulin-binding protein 60 B OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e038367_P001 No alias Calmodulin-binding protein 60 D OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e039693_P002 No alias Calmodulin-binding protein 60 B OS=Arabidopsis thaliana... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005516 calmodulin binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR012416 CBP60 92 383
No external refs found!