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  5. AMTR_s00027p00248560

AMTR_s00027p00248560


Description : Chromatin organisation.histones.H3-type histone


Gene families : OG0000119 (Archaeplastida) Phylogenetic Tree(s): OG0000119_tree ,
OG_05_0000124 (LandPlants) Phylogenetic Tree(s): OG_05_0000124_tree ,
OG_06_0000125 (SeedPlants) Phylogenetic Tree(s): OG_06_0000125_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00027p00248560
Cluster HCCA: Cluster_139

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00250010 No alias Chromatin organisation.histones.H3-type histone 0.03 Archaeplastida
AMTR_s00018p00168040 No alias Chromatin organisation.histones.H3-type histone 0.03 Archaeplastida
AT5G65360 No alias Histone superfamily protein 0.02 Archaeplastida
Cre16.g650300 No alias Chromatin organisation.histones.H3-type histone 0.02 Archaeplastida
GSVIVT01006535001 No alias Chromatin organisation.histones.H3-type histone 0.03 Archaeplastida
MA_113838g0010 No alias histone (H3) 0.03 Archaeplastida
Zm00001e008160_P001 No alias histone (H3) 0.03 Archaeplastida
Zm00001e018263_P001 No alias histone (H3) 0.05 Archaeplastida
Zm00001e019170_P001 No alias histone (H3) 0.03 Archaeplastida
Zm00001e040876_P001 No alias no hits & (original description: none) 0.06 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Neighborhood
MF GO:0080019 fatty-acyl-CoA reductase (alcohol-forming) activity IEP Neighborhood
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 58 132
No external refs found!