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  5. Solyc07g045520.4.1

Solyc07g045520.4.1


Description : transcription factor (FAR1)


Gene families : OG0009767 (Archaeplastida) Phylogenetic Tree(s): OG0009767_tree ,
OG_05_0009829 (LandPlants) Phylogenetic Tree(s): OG_05_0009829_tree ,
OG_06_0008051 (SeedPlants) Phylogenetic Tree(s): OG_06_0008051_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc07g045520.4.1
Cluster HCCA: Cluster_127

Target Alias Description ECC score Gene Family Method Actions
AT5G28530 FRS10 FAR1-related sequence 10 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0007186 G-protein coupled receptor signaling pathway IEP Neighborhood
BP GO:0010035 response to inorganic substance IEP Neighborhood
BP GO:0010038 response to metal ion IEP Neighborhood
MF GO:0015035 protein disulfide oxidoreductase activity IEP Neighborhood
MF GO:0015036 disulfide oxidoreductase activity IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Neighborhood
MF GO:0016755 transferase activity, transferring amino-acyl groups IEP Neighborhood
MF GO:0016756 glutathione gamma-glutamylcysteinyltransferase activity IEP Neighborhood
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Neighborhood
BP GO:0019748 secondary metabolic process IEP Neighborhood
MF GO:0031683 G-protein beta/gamma-subunit complex binding IEP Neighborhood
BP GO:0044550 secondary metabolite biosynthetic process IEP Neighborhood
MF GO:0044877 protein-containing complex binding IEP Neighborhood
BP GO:0046937 phytochelatin metabolic process IEP Neighborhood
BP GO:0046938 phytochelatin biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR007527 Znf_SWIM 535 561
IPR018289 MULE_transposase_dom 256 347
IPR004330 FAR1_DNA_bnd_dom 32 123
No external refs found!