Solyc07g053190.4.1


Description : no hits & (original description: none)


Gene families : OG0003310 (Archaeplastida) Phylogenetic Tree(s): OG0003310_tree ,
OG_05_0009785 (LandPlants) Phylogenetic Tree(s): OG_05_0009785_tree ,
OG_06_0007958 (SeedPlants) Phylogenetic Tree(s): OG_06_0007958_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc07g053190.4.1
Cluster HCCA: Cluster_131

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00142p00066900 evm_27.TU.AmTr_v1... No description available 0.01 Archaeplastida
AT5G04670 No alias Enhancer of polycomb-like transcription factor protein 0.03 Archaeplastida
GSVIVT01035731001 No alias No description available 0.11 Archaeplastida
Gb_25776 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os01g08430.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os02g01020.1 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_10428588g0010 No alias no hits & (original description: none) 0.06 Archaeplastida
MA_37588g0020 No alias no hits & (original description: none) 0.05 Archaeplastida
Mp8g09190.1 No alias no hits & (original description: none) 0.08 Archaeplastida
Pp3c11_12130V3.1 No alias Enhancer of polycomb-like transcription factor protein 0.07 Archaeplastida
Pp3c7_14100V3.1 No alias Enhancer of polycomb-like transcription factor protein 0.04 Archaeplastida
Smo444069 No alias No description available 0.03 Archaeplastida
Zm00001e022270_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e025916_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e039846_P002 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0000123 histone acetyltransferase complex IEP Neighborhood
CC GO:0000176 nuclear exosome (RNase complex) IEP Neighborhood
CC GO:0000178 exosome (RNase complex) IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006399 tRNA metabolic process IEP Neighborhood
BP GO:0006479 protein methylation IEP Neighborhood
BP GO:0008033 tRNA processing IEP Neighborhood
MF GO:0008170 N-methyltransferase activity IEP Neighborhood
BP GO:0008213 protein alkylation IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0008276 protein methyltransferase activity IEP Neighborhood
MF GO:0008408 3'-5' exonuclease activity IEP Neighborhood
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Neighborhood
MF GO:0016278 lysine N-methyltransferase activity IEP Neighborhood
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
BP GO:0016571 histone methylation IEP Neighborhood
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Neighborhood
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Neighborhood
BP GO:0018022 peptidyl-lysine methylation IEP Neighborhood
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0018193 peptidyl-amino acid modification IEP Neighborhood
BP GO:0018205 peptidyl-lysine modification IEP Neighborhood
CC GO:0031248 protein acetyltransferase complex IEP Neighborhood
BP GO:0032259 methylation IEP Neighborhood
BP GO:0034470 ncRNA processing IEP Neighborhood
BP GO:0034660 ncRNA metabolic process IEP Neighborhood
BP GO:0034968 histone lysine methylation IEP Neighborhood
MF GO:0042054 histone methyltransferase activity IEP Neighborhood
MF GO:0043015 gamma-tubulin binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0043414 macromolecule methylation IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0050660 flavin adenine dinucleotide binding IEP Neighborhood
CC GO:0070461 SAGA-type complex IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0140101 catalytic activity, acting on a tRNA IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
CC GO:1902493 acetyltransferase complex IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
CC GO:1905354 exoribonuclease complex IEP Neighborhood
InterPro domains Description Start Stop
IPR019542 Enhancer_polycomb-like_N 535 623
No external refs found!