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  5. Solyc07g054210.3.1

Solyc07g054210.3.1


Description : light-dependent protochlorophyllide oxidoreductase


Gene families : OG0003183 (Archaeplastida) Phylogenetic Tree(s): OG0003183_tree ,
OG_05_0003239 (LandPlants) Phylogenetic Tree(s): OG_05_0003239_tree ,
OG_06_0003199 (SeedPlants) Phylogenetic Tree(s): OG_06_0003199_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc07g054210.3.1
Cluster HCCA: Cluster_110

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00268600 evm_27.TU.AmTr_v1... Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll... 0.03 Archaeplastida
AT1G03630 POR C, PORC protochlorophyllide oxidoreductase C 0.03 Archaeplastida
AT4G27440 PORB protochlorophyllide oxidoreductase B 0.06 Archaeplastida
Cpa|evm.model.tig00000076.85 No alias Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll... 0.03 Archaeplastida
Cre01.g015350 No alias Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll... 0.06 Archaeplastida
GSVIVT01030386001 No alias Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll... 0.03 Archaeplastida
Gb_29310 No alias light-dependent protochlorophyllide oxidoreductase 0.03 Archaeplastida
LOC_Os10g35370.1 No alias light-dependent protochlorophyllide oxidoreductase 0.12 Archaeplastida
MA_10433385g0020 No alias light-dependent protochlorophyllide oxidoreductase 0.02 Archaeplastida
MA_91782g0010 No alias light-dependent protochlorophyllide oxidoreductase 0.03 Archaeplastida
Mp8g17840.1 No alias light-dependent protochlorophyllide oxidoreductase 0.05 Archaeplastida
Pp3c12_20650V3.1 No alias protochlorophyllide oxidoreductase A 0.09 Archaeplastida
Pp3c4_8470V3.1 No alias protochlorophyllide oxidoreductase A 0.05 Archaeplastida
Zm00001e004475_P001 No alias light-dependent protochlorophyllide oxidoreductase 0.05 Archaeplastida
Zm00001e012603_P001 No alias light-dependent protochlorophyllide oxidoreductase 0.12 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP Neighborhood
MF GO:0004109 coproporphyrinogen oxidase activity IEP Neighborhood
MF GO:0004359 glutaminase activity IEP Neighborhood
BP GO:0006081 cellular aldehyde metabolic process IEP Neighborhood
BP GO:0006766 vitamin metabolic process IEP Neighborhood
BP GO:0006767 water-soluble vitamin metabolic process IEP Neighborhood
BP GO:0006778 porphyrin-containing compound metabolic process IEP Neighborhood
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Neighborhood
BP GO:0009110 vitamin biosynthetic process IEP Neighborhood
CC GO:0009521 photosystem IEP Neighborhood
CC GO:0009522 photosystem I IEP Neighborhood
CC GO:0009538 photosystem I reaction center IEP Neighborhood
MF GO:0015291 secondary active transmembrane transporter activity IEP Neighborhood
MF GO:0015297 antiporter activity IEP Neighborhood
BP GO:0015979 photosynthesis IEP Neighborhood
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Neighborhood
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Neighborhood
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Neighborhood
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Neighborhood
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Neighborhood
BP GO:0018130 heterocycle biosynthetic process IEP Neighborhood
BP GO:0019438 aromatic compound biosynthetic process IEP Neighborhood
MF GO:0022804 active transmembrane transporter activity IEP Neighborhood
BP GO:0033013 tetrapyrrole metabolic process IEP Neighborhood
BP GO:0033014 tetrapyrrole biosynthetic process IEP Neighborhood
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Neighborhood
BP GO:0042816 vitamin B6 metabolic process IEP Neighborhood
BP GO:0042819 vitamin B6 biosynthetic process IEP Neighborhood
BP GO:0042822 pyridoxal phosphate metabolic process IEP Neighborhood
BP GO:0042823 pyridoxal phosphate biosynthetic process IEP Neighborhood
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Neighborhood
CC GO:0044436 thylakoid part IEP Neighborhood
BP GO:0046184 aldehyde biosynthetic process IEP Neighborhood
BP GO:0051186 cofactor metabolic process IEP Neighborhood
BP GO:0051188 cofactor biosynthetic process IEP Neighborhood
BP GO:0072524 pyridine-containing compound metabolic process IEP Neighborhood
BP GO:0072525 pyridine-containing compound biosynthetic process IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
BP GO:1901362 organic cyclic compound biosynthetic process IEP Neighborhood
BP GO:1901615 organic hydroxy compound metabolic process IEP Neighborhood
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR002347 SDR_fam 89 231
No external refs found!