Solyc07g054820.4.1


Description : no hits & (original description: none)


Gene families : OG0007097 (Archaeplastida) Phylogenetic Tree(s): OG0007097_tree ,
OG_05_0008533 (LandPlants) Phylogenetic Tree(s): OG_05_0008533_tree ,
OG_06_0010084 (SeedPlants) Phylogenetic Tree(s): OG_06_0010084_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc07g054820.4.1
Cluster HCCA: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
AT2G20890 PSB29, THF1 photosystem II reaction center PSB29 protein 0.22 Archaeplastida
Cre13.g562850 No alias Photosynthesis.photophosphorylation.photosystem... 0.03 Archaeplastida
GSVIVT01029990001 No alias Photosynthesis.photophosphorylation.photosystem... 0.12 Archaeplastida
MA_10426766g0010 No alias Psb29 protein involved in PS-II assembly 0.06 Archaeplastida
Mp5g23000.1 No alias Psb29 protein involved in PS-II assembly 0.06 Archaeplastida
Pp3c19_17570V3.1 No alias photosystem II reaction center PSB29 protein 0.02 Archaeplastida
Pp3c21_14540V3.1 No alias photosystem II reaction center PSB29 protein 0.13 Archaeplastida
Zm00001e010549_P003 No alias Psb29 protein involved in PS-II assembly 0.02 Archaeplastida
Zm00001e035236_P001 No alias Psb29 protein involved in PS-II assembly 0.08 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0004618 phosphoglycerate kinase activity IEP Neighborhood
MF GO:0004813 alanine-tRNA ligase activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
BP GO:0006066 alcohol metabolic process IEP Neighborhood
BP GO:0006082 organic acid metabolic process IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006163 purine nucleotide metabolic process IEP Neighborhood
BP GO:0006164 purine nucleotide biosynthetic process IEP Neighborhood
BP GO:0006419 alanyl-tRNA aminoacylation IEP Neighborhood
BP GO:0006520 cellular amino acid metabolic process IEP Neighborhood
BP GO:0006536 glutamate metabolic process IEP Neighborhood
BP GO:0006537 glutamate biosynthetic process IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0006729 tetrahydrobiopterin biosynthetic process IEP Neighborhood
BP GO:0006732 coenzyme metabolic process IEP Neighborhood
BP GO:0006753 nucleoside phosphate metabolic process IEP Neighborhood
BP GO:0006754 ATP biosynthetic process IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006812 cation transport IEP Neighborhood
MF GO:0008124 4-alpha-hydroxytetrahydrobiopterin dehydratase activity IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008324 cation transmembrane transporter activity IEP Neighborhood
MF GO:0008565 protein transporter activity IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009064 glutamine family amino acid metabolic process IEP Neighborhood
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Neighborhood
BP GO:0009108 coenzyme biosynthetic process IEP Neighborhood
BP GO:0009117 nucleotide metabolic process IEP Neighborhood
BP GO:0009123 nucleoside monophosphate metabolic process IEP Neighborhood
BP GO:0009124 nucleoside monophosphate biosynthetic process IEP Neighborhood
BP GO:0009126 purine nucleoside monophosphate metabolic process IEP Neighborhood
BP GO:0009127 purine nucleoside monophosphate biosynthetic process IEP Neighborhood
BP GO:0009141 nucleoside triphosphate metabolic process IEP Neighborhood
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP Neighborhood
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP Neighborhood
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP Neighborhood
BP GO:0009150 purine ribonucleotide metabolic process IEP Neighborhood
BP GO:0009152 purine ribonucleotide biosynthetic process IEP Neighborhood
BP GO:0009156 ribonucleoside monophosphate biosynthetic process IEP Neighborhood
BP GO:0009161 ribonucleoside monophosphate metabolic process IEP Neighborhood
BP GO:0009165 nucleotide biosynthetic process IEP Neighborhood
BP GO:0009167 purine ribonucleoside monophosphate metabolic process IEP Neighborhood
BP GO:0009168 purine ribonucleoside monophosphate biosynthetic process IEP Neighborhood
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP Neighborhood
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP Neighborhood
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP Neighborhood
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP Neighborhood
BP GO:0009259 ribonucleotide metabolic process IEP Neighborhood
BP GO:0009260 ribonucleotide biosynthetic process IEP Neighborhood
CC GO:0009512 cytochrome b6f complex IEP Neighborhood
CC GO:0009521 photosystem IEP Neighborhood
CC GO:0009523 photosystem II IEP Neighborhood
CC GO:0009654 photosystem II oxygen evolving complex IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0010109 regulation of photosynthesis IEP Neighborhood
BP GO:0010207 photosystem II assembly IEP Neighborhood
MF GO:0010242 oxygen evolving activity IEP Neighborhood
MF GO:0015075 ion transmembrane transporter activity IEP Neighborhood
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Neighborhood
MF GO:0015078 proton transmembrane transporter activity IEP Neighborhood
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Neighborhood
MF GO:0015399 primary active transmembrane transporter activity IEP Neighborhood
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Neighborhood
BP GO:0015672 monovalent inorganic cation transport IEP Neighborhood
MF GO:0015930 glutamate synthase activity IEP Neighborhood
BP GO:0015979 photosynthesis IEP Neighborhood
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP Neighborhood
BP GO:0015986 ATP synthesis coupled proton transport IEP Neighborhood
BP GO:0016053 organic acid biosynthetic process IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Neighborhood
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0016835 carbon-oxygen lyase activity IEP Neighborhood
MF GO:0016836 hydro-lyase activity IEP Neighborhood
MF GO:0016853 isomerase activity IEP Neighborhood
MF GO:0016854 racemase and epimerase activity IEP Neighborhood
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
MF GO:0016887 ATPase activity IEP Neighborhood
BP GO:0017038 protein import IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
BP GO:0017144 drug metabolic process IEP Neighborhood
BP GO:0018130 heterocycle biosynthetic process IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
BP GO:0019438 aromatic compound biosynthetic process IEP Neighborhood
BP GO:0019637 organophosphate metabolic process IEP Neighborhood
BP GO:0019693 ribose phosphate metabolic process IEP Neighborhood
BP GO:0019751 polyol metabolic process IEP Neighborhood
BP GO:0019752 carboxylic acid metabolic process IEP Neighborhood
MF GO:0019829 cation-transporting ATPase activity IEP Neighborhood
CC GO:0019898 extrinsic component of membrane IEP Neighborhood
MF GO:0022804 active transmembrane transporter activity IEP Neighborhood
MF GO:0022853 active ion transmembrane transporter activity IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
MF GO:0032977 membrane insertase activity IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Neighborhood
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP Neighborhood
BP GO:0034220 ion transmembrane transport IEP Neighborhood
BP GO:0034311 diol metabolic process IEP Neighborhood
BP GO:0034312 diol biosynthetic process IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Neighborhood
BP GO:0042548 regulation of photosynthesis, light reaction IEP Neighborhood
BP GO:0042549 photosystem II stabilization IEP Neighborhood
BP GO:0042558 pteridine-containing compound metabolic process IEP Neighborhood
BP GO:0042559 pteridine-containing compound biosynthetic process IEP Neighborhood
MF GO:0042623 ATPase activity, coupled IEP Neighborhood
MF GO:0042625 ATPase coupled ion transmembrane transporter activity IEP Neighborhood
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Neighborhood
BP GO:0043436 oxoacid metabolic process IEP Neighborhood
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP Neighborhood
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Neighborhood
BP GO:0043648 dicarboxylic acid metabolic process IEP Neighborhood
BP GO:0043650 dicarboxylic acid biosynthetic process IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Neighborhood
BP GO:0044281 small molecule metabolic process IEP Neighborhood
BP GO:0044283 small molecule biosynthetic process IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044436 thylakoid part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP Neighborhood
CC GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) IEP Neighborhood
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP Neighborhood
BP GO:0046034 ATP metabolic process IEP Neighborhood
BP GO:0046146 tetrahydrobiopterin metabolic process IEP Neighborhood
BP GO:0046165 alcohol biosynthetic process IEP Neighborhood
BP GO:0046173 polyol biosynthetic process IEP Neighborhood
BP GO:0046390 ribose phosphate biosynthetic process IEP Neighborhood
BP GO:0046394 carboxylic acid biosynthetic process IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP Neighborhood
BP GO:0051186 cofactor metabolic process IEP Neighborhood
BP GO:0051188 cofactor biosynthetic process IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
MF GO:0051920 peroxiredoxin activity IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Neighborhood
CC GO:0070069 cytochrome complex IEP Neighborhood
BP GO:0072521 purine-containing compound metabolic process IEP Neighborhood
BP GO:0072522 purine-containing compound biosynthetic process IEP Neighborhood
BP GO:0090407 organophosphate biosynthetic process IEP Neighborhood
BP GO:0098655 cation transmembrane transport IEP Neighborhood
BP GO:0098660 inorganic ion transmembrane transport IEP Neighborhood
BP GO:0098662 inorganic cation transmembrane transport IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
BP GO:1901135 carbohydrate derivative metabolic process IEP Neighborhood
BP GO:1901137 carbohydrate derivative biosynthetic process IEP Neighborhood
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
BP GO:1901362 organic cyclic compound biosynthetic process IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
BP GO:1901566 organonitrogen compound biosynthetic process IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
BP GO:1901615 organic hydroxy compound metabolic process IEP Neighborhood
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
BP GO:1902600 proton transmembrane transport IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!