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  5. Solyc07g055950.3.1

Solyc07g055950.3.1


Description : Protodermal factor 1 OS=Arabidopsis thaliana (sp|q9s728|pdf1_arath : 113.0)


Gene families : OG0001668 (Archaeplastida) Phylogenetic Tree(s): OG0001668_tree ,
OG_05_0001072 (LandPlants) Phylogenetic Tree(s): OG_05_0001072_tree ,
OG_06_0004253 (SeedPlants) Phylogenetic Tree(s): OG_06_0004253_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc07g055950.3.1
Cluster HCCA: Cluster_120

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00068p00158450 evm_27.TU.AmTr_v1... Protodermal factor 1 OS=Arabidopsis thaliana 0.05 Archaeplastida
AMTR_s00858p00001360 evm_27.TU.AmTr_v1... No description available 0.07 Archaeplastida
LOC_Os01g10490.1 No alias no hits & (original description: none) 0.1 Archaeplastida
LOC_Os02g13660.1 No alias Protodermal factor 1 OS=Arabidopsis thaliana... 0.05 Archaeplastida
LOC_Os04g43670.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os06g35970.1 No alias Protodermal factor 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_111671g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
Mp3g10620.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp4g22090.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Smo437656 No alias No description available 0.04 Archaeplastida
Zm00001e016528_P003 No alias no hits & (original description: none) 0.06 Archaeplastida
Zm00001e030674_P001 No alias no hits & (original description: none) 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP Neighborhood
MF GO:0004185 serine-type carboxypeptidase activity IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
MF GO:0008238 exopeptidase activity IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
MF GO:0070008 serine-type exopeptidase activity IEP Neighborhood
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!