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  5. Solyc07g062790.1.1

Solyc07g062790.1.1


Description : transcription factor (HD-ZIP I/II)


Gene families : OG0000146 (Archaeplastida) Phylogenetic Tree(s): OG0000146_tree ,
OG_05_0000061 (LandPlants) Phylogenetic Tree(s): OG_05_0000061_tree ,
OG_06_0017027 (SeedPlants) Phylogenetic Tree(s): OG_06_0017027_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc07g062790.1.1
Cluster HCCA: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00235500 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.04 Archaeplastida
AT1G27045 No alias Homeobox-leucine zipper protein family 0.03 Archaeplastida
AT2G46680 HB-7, ATHB-7, ATHB7 homeobox 7 0.03 Archaeplastida
AT3G01220 ATHB20, HB20 homeobox protein 20 0.02 Archaeplastida
AT5G53980 ATHB52, HB52 homeobox protein 52 0.02 Archaeplastida
AT5G66700 ATHB53, HB53, HB-8 homeobox 53 0.05 Archaeplastida
Gb_07209 No alias Homeobox-leucine zipper protein HAT7 OS=Arabidopsis... 0.03 Archaeplastida
Gb_35959 No alias transcription factor (HD-ZIP I/II) 0.04 Archaeplastida
Gb_39722 No alias transcription factor (HD-ZIP I/II) 0.04 Archaeplastida
LOC_Os02g43330.1 No alias transcription factor (HD-ZIP I/II) 0.02 Archaeplastida
LOC_Os03g08960.1 No alias transcription factor (HD-ZIP I/II) 0.02 Archaeplastida
LOC_Os03g10210.1 No alias transcription factor (HD-ZIP I/II) 0.03 Archaeplastida
LOC_Os04g45810.1 No alias transcription factor (HD-ZIP I/II) 0.02 Archaeplastida
LOC_Os08g32080.1 No alias transcription factor (HD-ZIP I/II) 0.05 Archaeplastida
LOC_Os08g32085.1 No alias transcription factor (HD-ZIP I/II) 0.05 Archaeplastida
LOC_Os10g23090.1 No alias transcription factor (HD-ZIP I/II) 0.04 Archaeplastida
MA_10428916g0010 No alias transcription factor (HD-ZIP I/II) 0.02 Archaeplastida
MA_128g0010 No alias transcription factor (HD-ZIP I/II) 0.03 Archaeplastida
MA_19453g0050 No alias Homeobox-leucine zipper protein HAT5 OS=Arabidopsis... 0.04 Archaeplastida
Pp3c11_23440V3.1 No alias homeobox 1 0.03 Archaeplastida
Pp3c12_21760V3.1 No alias homeobox protein 16 0.03 Archaeplastida
Pp3c1_37070V3.1 No alias homeobox protein 16 0.02 Archaeplastida
Pp3c7_2100V3.1 No alias Homeobox-leucine zipper protein family 0.02 Archaeplastida
Pp3c8_440V3.1 No alias homeobox 3 0.04 Archaeplastida
Solyc01g010600.4.1 No alias transcription factor (HD-ZIP I/II) 0.03 Archaeplastida
Solyc02g067410.2.1 No alias transcription factor (HD-ZIP I/II) 0.03 Archaeplastida
Zm00001e007381_P001 No alias transcription factor (HD-ZIP I/II) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004650 polygalacturonase activity IEP Neighborhood
MF GO:0010333 terpene synthase activity IEP Neighborhood
MF GO:0016835 carbon-oxygen lyase activity IEP Neighborhood
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Neighborhood
InterPro domains Description Start Stop
IPR001356 Homeobox_dom 17 71
No external refs found!