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  5. Solyc07g062970.3.1

Solyc07g062970.3.1


Description : clade F phosphatase


Gene families : OG0000213 (Archaeplastida) Phylogenetic Tree(s): OG0000213_tree ,
OG_05_0000775 (LandPlants) Phylogenetic Tree(s): OG_05_0000775_tree ,
OG_06_0003016 (SeedPlants) Phylogenetic Tree(s): OG_06_0003016_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc07g062970.3.1
Cluster HCCA: Cluster_230

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00183p00042550 evm_27.TU.AmTr_v1... Protein modification.dephosphorylation.serine/threonine... 0.02 Archaeplastida
AT2G34740 No alias Protein phosphatase 2C family protein 0.03 Archaeplastida
AT4G28400 No alias Protein phosphatase 2C family protein 0.04 Archaeplastida
Cpa|evm.model.tig00000704.67 No alias Probable protein phosphatase 2C 47 OS=Arabidopsis thaliana 0.01 Archaeplastida
GSVIVT01004849001 No alias Protein modification.dephosphorylation.serine/threonine... 0.04 Archaeplastida
GSVIVT01009035001 No alias Protein modification.dephosphorylation.serine/threonine... 0.03 Archaeplastida
GSVIVT01034268001 No alias Protein modification.dephosphorylation.serine/threonine... 0.03 Archaeplastida
Gb_23929 No alias Probable protein phosphatase 2C 52 OS=Oryza sativa... 0.03 Archaeplastida
Gb_37114 No alias Probable protein phosphatase 2C 59 OS=Arabidopsis... 0.02 Archaeplastida
LOC_Os07g33230.1 No alias Putative protein phosphatase 2C 63 OS=Oryza sativa... 0.05 Archaeplastida
MA_103285g0010 No alias No annotation 0.03 Archaeplastida
Mp3g18710.1 No alias clade F phosphatase 0.02 Archaeplastida
Pp3c27_290V3.1 No alias Protein phosphatase 2C family protein 0.04 Archaeplastida
Zm00001e010471_P001 No alias clade F phosphatase 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Neighborhood
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Neighborhood
BP GO:0000398 mRNA splicing, via spliceosome IEP Neighborhood
BP GO:0001101 response to acid chemical IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity IEP Neighborhood
MF GO:0004556 alpha-amylase activity IEP Neighborhood
MF GO:0005102 signaling receptor binding IEP Neighborhood
MF GO:0008083 growth factor activity IEP Neighborhood
BP GO:0008283 cell proliferation IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
BP GO:0009415 response to water IEP Neighborhood
BP GO:0009628 response to abiotic stimulus IEP Neighborhood
CC GO:0009654 photosystem II oxygen evolving complex IEP Neighborhood
MF GO:0010011 auxin binding IEP Neighborhood
BP GO:0010035 response to inorganic substance IEP Neighborhood
MF GO:0016160 amylase activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Neighborhood
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Neighborhood
CC GO:0030118 clathrin coat IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030125 clathrin vesicle coat IEP Neighborhood
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Neighborhood
CC GO:0030132 clathrin coat of coated pit IEP Neighborhood
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Neighborhood
MF GO:0030545 receptor regulator activity IEP Neighborhood
CC GO:0034357 photosynthetic membrane IEP Neighborhood
MF GO:0042562 hormone binding IEP Neighborhood
CC GO:0042651 thylakoid membrane IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
CC GO:0046540 U4/U6 x U5 tri-snRNP complex IEP Neighborhood
MF GO:0048018 receptor ligand activity IEP Neighborhood
MF GO:0051087 chaperone binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
CC GO:0097525 spliceosomal snRNP complex IEP Neighborhood
CC GO:0097526 spliceosomal tri-snRNP complex IEP Neighborhood
CC GO:0098797 plasma membrane protein complex IEP Neighborhood
CC GO:0120114 Sm-like protein family complex IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1901700 response to oxygen-containing compound IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR001932 PPM-type_phosphatase_dom 44 274
No external refs found!