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  5. Solyc07g064040.3.1

Solyc07g064040.3.1


Description : transcription factor (bHLH). PRI1 iron uptake signal transduction factor


Gene families : OG0000742 (Archaeplastida) Phylogenetic Tree(s): OG0000742_tree ,
OG_05_0001001 (LandPlants) Phylogenetic Tree(s): OG_05_0001001_tree ,
OG_06_0000987 (SeedPlants) Phylogenetic Tree(s): OG_06_0000987_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc07g064040.3.1
Cluster HCCA: Cluster_216

Target Alias Description ECC score Gene Family Method Actions
AT4G14410 bHLH104 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.05 Archaeplastida
GSVIVT01014589001 No alias Nutrient uptake.iron uptake.regulation.PRI1 signal... 0.04 Archaeplastida
GSVIVT01027766001 No alias Nutrient uptake.iron uptake.regulation.PRI1 signal... 0.03 Archaeplastida
LOC_Os02g23823.1 No alias transcription factor (bHLH). iron homeostasis regulator (POPEYE) 0.04 Archaeplastida
MA_77746g0010 No alias transcription factor (bHLH) 0.02 Archaeplastida
Mp2g26400.1 No alias transcription factor (bHLH). iron homeostasis regulator (POPEYE) 0.03 Archaeplastida
Zm00001e035178_P001 No alias transcription factor (bHLH). PRI1 iron uptake signal... 0.03 Archaeplastida
Zm00001e040298_P001 No alias transcription factor (bHLH). PRI1 iron uptake signal... 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000976 transcription regulatory region sequence-specific DNA binding IEP Neighborhood
MF GO:0000977 RNA polymerase II regulatory region sequence-specific DNA binding IEP Neighborhood
MF GO:0001012 RNA polymerase II regulatory region DNA binding IEP Neighborhood
MF GO:0001067 regulatory region nucleic acid binding IEP Neighborhood
MF GO:0003690 double-stranded DNA binding IEP Neighborhood
MF GO:0004197 cysteine-type endopeptidase activity IEP Neighborhood
MF GO:0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity IEP Neighborhood
MF GO:0004560 alpha-L-fucosidase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005779 integral component of peroxisomal membrane IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006813 potassium ion transport IEP Neighborhood
MF GO:0015075 ion transmembrane transporter activity IEP Neighborhood
MF GO:0015079 potassium ion transmembrane transporter activity IEP Neighborhood
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Neighborhood
MF GO:0015928 fucosidase activity IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
BP GO:0016485 protein processing IEP Neighborhood
BP GO:0016559 peroxisome fission IEP Neighborhood
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Neighborhood
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
CC GO:0031231 intrinsic component of peroxisomal membrane IEP Neighborhood
CC GO:0031300 intrinsic component of organelle membrane IEP Neighborhood
CC GO:0031301 integral component of organelle membrane IEP Neighborhood
MF GO:0032422 purine-rich negative regulatory element binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
MF GO:0044212 transcription regulatory region DNA binding IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
CC GO:0044438 microbody part IEP Neighborhood
CC GO:0044439 peroxisomal part IEP Neighborhood
BP GO:0048285 organelle fission IEP Neighborhood
MF GO:0050661 NADP binding IEP Neighborhood
BP GO:0051604 protein maturation IEP Neighborhood
BP GO:0071586 CAAX-box protein processing IEP Neighborhood
BP GO:0071804 cellular potassium ion transport IEP Neighborhood
BP GO:0071805 potassium ion transmembrane transport IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
MF GO:1990837 sequence-specific double-stranded DNA binding IEP Neighborhood
InterPro domains Description Start Stop
IPR011598 bHLH_dom 78 125
No external refs found!