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Aliases : evm_27.TU.AmTr_v1.0_scaffold00029.5
Description : Transcription factor SRM1 OS=Arabidopsis thaliana
Gene families : OG0000067 (Archaeplastida) Phylogenetic Tree(s): OG0000067_tree ,
OG_05_0000498 (LandPlants) Phylogenetic Tree(s): OG_05_0000498_tree ,
OG_06_0000376 (SeedPlants) Phylogenetic Tree(s): OG_06_0000376_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AMTR_s00029p00022290 | |
| Cluster | HCCA: Cluster_27 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT2G38090 | No alias | Duplicated homeodomain-like superfamily protein | 0.03 | Archaeplastida | |
| AT5G05790 | No alias | Duplicated homeodomain-like superfamily protein | 0.04 | Archaeplastida | |
| Cre10.g430750 | No alias | RNA biosynthesis.transcriptional activation.MYB... | 0.01 | Archaeplastida | |
| GSVIVT01005816001 | No alias | RNA biosynthesis.transcriptional activation.MYB... | 0.02 | Archaeplastida | |
| GSVIVT01007843001 | No alias | RNA biosynthesis.transcriptional activation.MYB... | 0.01 | Archaeplastida | |
| GSVIVT01034001001 | No alias | RNA biosynthesis.transcriptional activation.MYB... | 0.03 | Archaeplastida | |
| GSVIVT01035363001 | No alias | RNA biosynthesis.transcriptional activation.MYB... | 0.03 | Archaeplastida | |
| Gb_28483 | No alias | transcription factor (MYB-related) | 0.03 | Archaeplastida | |
| LOC_Os01g04930.1 | No alias | transcription factor (MYB-related) | 0.04 | Archaeplastida | |
| LOC_Os01g41900.1 | No alias | transcription factor (MYB-related) | 0.02 | Archaeplastida | |
| LOC_Os01g63460.1 | No alias | transcription factor (MYB-related) | 0.04 | Archaeplastida | |
| LOC_Os01g64360.1 | No alias | transcription factor (MYB-related) | 0.02 | Archaeplastida | |
| LOC_Os05g37730.1 | No alias | transcription factor (MYB-related) | 0.03 | Archaeplastida | |
| LOC_Os08g05510.1 | No alias | transcription factor (MYB-related) | 0.01 | Archaeplastida | |
| MA_10432538g0010 | No alias | transcription factor (MYB-related) | 0.02 | Archaeplastida | |
| MA_16729g0010 | No alias | transcription factor (MYB-related) | 0.02 | Archaeplastida | |
| MA_413315g0010 | No alias | transcription factor (MYB-related) | 0.02 | Archaeplastida | |
| MA_7049680g0010 | No alias | no hits & (original description: none) | 0.01 | Archaeplastida | |
| MA_957399g0010 | No alias | transcription factor (MYB-related) | 0.02 | Archaeplastida | |
| Pp3c15_23110V3.1 | No alias | myb-like transcription factor family protein | 0.02 | Archaeplastida | |
| Pp3c26_6730V3.1 | No alias | Duplicated homeodomain-like superfamily protein | 0.02 | Archaeplastida | |
| Smo84280 | No alias | RNA biosynthesis.transcriptional activation.MYB... | 0.02 | Archaeplastida | |
| Solyc03g096350.3.1 | No alias | transcription factor (MYB-related) | 0.03 | Archaeplastida | |
| Solyc03g119740.3.1 | No alias | transcription factor (MYB-related) | 0.01 | Archaeplastida | |
| Solyc07g026680.2.1 | No alias | transcription factor (MYB-related) | 0.03 | Archaeplastida | |
| Solyc09g014250.3.1 | No alias | transcription factor (MYB-related) | 0.03 | Archaeplastida | |
| Zm00001e002313_P001 | No alias | transcription factor (MYB-related) | 0.02 | Archaeplastida | |
| Zm00001e025784_P001 | No alias | transcription factor (MYB-related) | 0.04 | Archaeplastida | |
| Zm00001e032519_P001 | No alias | transcription factor (MYB-related) | 0.03 | Archaeplastida | |
| Zm00001e037865_P001 | No alias | transcription factor (MYB-related) | 0.03 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000145 | exocyst | IEP | Neighborhood |
| MF | GO:0003674 | molecular_function | IEP | Neighborhood |
| MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
| MF | GO:0003682 | chromatin binding | IEP | Neighborhood |
| MF | GO:0003712 | transcription coregulator activity | IEP | Neighborhood |
| MF | GO:0004197 | cysteine-type endopeptidase activity | IEP | Neighborhood |
| MF | GO:0004402 | histone acetyltransferase activity | IEP | Neighborhood |
| MF | GO:0004672 | protein kinase activity | IEP | Neighborhood |
| MF | GO:0004721 | phosphoprotein phosphatase activity | IEP | Neighborhood |
| MF | GO:0005488 | binding | IEP | Neighborhood |
| BP | GO:0006099 | tricarboxylic acid cycle | IEP | Neighborhood |
| BP | GO:0006101 | citrate metabolic process | IEP | Neighborhood |
| BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Neighborhood |
| BP | GO:0006464 | cellular protein modification process | IEP | Neighborhood |
| BP | GO:0006468 | protein phosphorylation | IEP | Neighborhood |
| BP | GO:0006470 | protein dephosphorylation | IEP | Neighborhood |
| BP | GO:0006793 | phosphorus metabolic process | IEP | Neighborhood |
| BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0006904 | vesicle docking involved in exocytosis | IEP | Neighborhood |
| MF | GO:0008138 | protein tyrosine/serine/threonine phosphatase activity | IEP | Neighborhood |
| MF | GO:0008964 | phosphoenolpyruvate carboxylase activity | IEP | Neighborhood |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | Neighborhood |
| BP | GO:0010468 | regulation of gene expression | IEP | Neighborhood |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:0015977 | carbon fixation | IEP | Neighborhood |
| MF | GO:0016301 | kinase activity | IEP | Neighborhood |
| MF | GO:0016307 | phosphatidylinositol phosphate kinase activity | IEP | Neighborhood |
| BP | GO:0016310 | phosphorylation | IEP | Neighborhood |
| BP | GO:0016311 | dephosphorylation | IEP | Neighborhood |
| MF | GO:0016620 | oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | IEP | Neighborhood |
| MF | GO:0016740 | transferase activity | IEP | Neighborhood |
| MF | GO:0016746 | transferase activity, transferring acyl groups | IEP | Neighborhood |
| MF | GO:0016747 | transferase activity, transferring acyl groups other than amino-acyl groups | IEP | Neighborhood |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | Neighborhood |
| MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | Neighborhood |
| BP | GO:0016999 | antibiotic metabolic process | IEP | Neighborhood |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0022406 | membrane docking | IEP | Neighborhood |
| MF | GO:0030246 | carbohydrate binding | IEP | Neighborhood |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Neighborhood |
| MF | GO:0034212 | peptide N-acetyltransferase activity | IEP | Neighborhood |
| BP | GO:0036211 | protein modification process | IEP | Neighborhood |
| BP | GO:0043412 | macromolecule modification | IEP | Neighborhood |
| BP | GO:0044267 | cellular protein metabolic process | IEP | Neighborhood |
| CC | GO:0044448 | cell cortex part | IEP | Neighborhood |
| BP | GO:0048278 | vesicle docking | IEP | Neighborhood |
| BP | GO:0050794 | regulation of cellular process | IEP | Neighborhood |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | Neighborhood |
| BP | GO:0051640 | organelle localization | IEP | Neighborhood |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Neighborhood |
| MF | GO:0061733 | peptide-lysine-N-acetyltransferase activity | IEP | Neighborhood |
| BP | GO:0065007 | biological regulation | IEP | Neighborhood |
| BP | GO:0072350 | tricarboxylic acid metabolic process | IEP | Neighborhood |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | Neighborhood |
| BP | GO:0140029 | exocytic process | IEP | Neighborhood |
| BP | GO:0140056 | organelle localization by membrane tethering | IEP | Neighborhood |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | Neighborhood |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Neighborhood |
| BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |