1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc07g065030.3.1

Solyc07g065030.3.1


Description : SYP5 group Qc-type SNARE protein


Gene families : OG0002466 (Archaeplastida) Phylogenetic Tree(s): OG0002466_tree ,
OG_05_0002139 (LandPlants) Phylogenetic Tree(s): OG_05_0002139_tree ,
OG_06_0002251 (SeedPlants) Phylogenetic Tree(s): OG_06_0002251_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc07g065030.3.1
Cluster HCCA: Cluster_177

Target Alias Description ECC score Gene Family Method Actions
AT1G16240 ATSYP51, SYP51 syntaxin of plants 51 0.03 Archaeplastida
AT1G79590 ATSYP52, SYP52 syntaxin of plants 52 0.06 Archaeplastida
Mp3g14430.1 No alias SYP5 group Qc-type SNARE protein 0.02 Archaeplastida
Pp3c7_22590V3.1 No alias syntaxin of plants 51 0.03 Archaeplastida
Smo441012 No alias Vesicle trafficking.SNARE target membrane recognition... 0.02 Archaeplastida
Zm00001e006817_P002 No alias SYP5 group Qc-type SNARE protein 0.03 Archaeplastida
Zm00001e022242_P001 No alias SYP5 group Qc-type SNARE protein 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
MF GO:0005544 calcium-dependent phospholipid binding IEP Neighborhood
BP GO:0006334 nucleosome assembly IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0006897 endocytosis IEP Neighborhood
BP GO:0007021 tubulin complex assembly IEP Neighborhood
BP GO:0007023 post-chaperonin tubulin folding pathway IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
BP GO:0022904 respiratory electron transport chain IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
BP GO:0034728 nucleosome organization IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
CC GO:0044455 mitochondrial membrane part IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
MF GO:0048487 beta-tubulin binding IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
MF GO:0061630 ubiquitin protein ligase activity IEP Neighborhood
MF GO:0061659 ubiquitin-like protein ligase activity IEP Neighborhood
BP GO:0065003 protein-containing complex assembly IEP Neighborhood
BP GO:0065004 protein-DNA complex assembly IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
BP GO:0071824 protein-DNA complex subunit organization IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
BP GO:0098657 import into cell IEP Neighborhood
CC GO:0098798 mitochondrial protein complex IEP Neighborhood
CC GO:0098800 inner mitochondrial membrane protein complex IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR000727 T_SNARE_dom 174 224
No external refs found!