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Description : no hits & (original description: none)
Gene families : OG0001759 (Archaeplastida) Phylogenetic Tree(s): OG0001759_tree ,
OG_05_0001672 (LandPlants) Phylogenetic Tree(s): OG_05_0001672_tree ,
OG_06_0001287 (SeedPlants) Phylogenetic Tree(s): OG_06_0001287_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Solyc07g065490.3.1 | |
| Cluster | HCCA: Cluster_8 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00047p00118220 | evm_27.TU.AmTr_v1... | No description available | 0.04 | Archaeplastida | |
| AT4G26630 | No alias | DEK domain-containing chromatin associated protein | 0.06 | Archaeplastida | |
| AT5G55660 | No alias | DEK domain-containing chromatin associated protein | 0.05 | Archaeplastida | |
| Cpa|evm.model.tig00000692.24 | No alias | No description available | 0.03 | Archaeplastida | |
| LOC_Os01g70020.1 | No alias | no hits & (original description: none) | 0.04 | Archaeplastida | |
| LOC_Os03g40010.1 | No alias | no hits & (original description: none) | 0.09 | Archaeplastida | |
| MA_108165g0010 | No alias | no hits & (original description: none) | 0.04 | Archaeplastida | |
| Mp7g19100.1 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
| Pp3c14_4960V3.1 | No alias | DEK domain-containing chromatin associated protein | 0.02 | Archaeplastida | |
| Smo438416 | No alias | No description available | 0.07 | Archaeplastida | |
| Zm00001e004959_P001 | No alias | no hits & (original description: none) | 0.12 | Archaeplastida | |
| Zm00001e012462_P001 | No alias | no hits & (original description: none) | 0.14 | Archaeplastida | |
| Zm00001e028422_P002 | No alias | no hits & (original description: none) | 0.06 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000350 | generation of catalytic spliceosome for second transesterification step | IEP | Neighborhood |
| BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | Neighborhood |
| BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | Neighborhood |
| BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | Neighborhood |
| MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | Neighborhood |
| CC | GO:0005643 | nuclear pore | IEP | Neighborhood |
| CC | GO:0005694 | chromosome | IEP | Neighborhood |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0006396 | RNA processing | IEP | Neighborhood |
| BP | GO:0006397 | mRNA processing | IEP | Neighborhood |
| BP | GO:0006476 | protein deacetylation | IEP | Neighborhood |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Neighborhood |
| BP | GO:0008380 | RNA splicing | IEP | Neighborhood |
| BP | GO:0010629 | negative regulation of gene expression | IEP | Neighborhood |
| BP | GO:0016043 | cellular component organization | IEP | Neighborhood |
| BP | GO:0016070 | RNA metabolic process | IEP | Neighborhood |
| BP | GO:0016071 | mRNA metabolic process | IEP | Neighborhood |
| BP | GO:0016458 | gene silencing | IEP | Neighborhood |
| BP | GO:0016575 | histone deacetylation | IEP | Neighborhood |
| MF | GO:0016853 | isomerase activity | IEP | Neighborhood |
| MF | GO:0016859 | cis-trans isomerase activity | IEP | Neighborhood |
| BP | GO:0022618 | ribonucleoprotein complex assembly | IEP | Neighborhood |
| CC | GO:0030684 | preribosome | IEP | Neighborhood |
| CC | GO:0030688 | preribosome, small subunit precursor | IEP | Neighborhood |
| BP | GO:0031047 | gene silencing by RNA | IEP | Neighborhood |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0035601 | protein deacylation | IEP | Neighborhood |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Neighborhood |
| MF | GO:0047429 | nucleoside-triphosphate diphosphatase activity | IEP | Neighborhood |
| BP | GO:0071826 | ribonucleoprotein complex subunit organization | IEP | Neighborhood |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | Neighborhood |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Neighborhood |
| BP | GO:0098732 | macromolecule deacylation | IEP | Neighborhood |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR014876 | DEK_C | 606 | 659 |
| No external refs found! |