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  5. Solyc08g005450.3.1

Solyc08g005450.3.1


Description : CAX-interacting protein 4 OS=Arabidopsis thaliana (sp|q84y18|cxip4_arath : 178.0)


Gene families : OG0006660 (Archaeplastida) Phylogenetic Tree(s): OG0006660_tree ,
OG_05_0007737 (LandPlants) Phylogenetic Tree(s): OG_05_0007737_tree ,
OG_06_0008189 (SeedPlants) Phylogenetic Tree(s): OG_06_0008189_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g005450.3.1
Cluster HCCA: Cluster_247

Target Alias Description ECC score Gene Family Method Actions
Mp3g05800.1 No alias CAX-interacting protein 4 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e009449_P001 No alias CAX-interacting protein 4 OS=Arabidopsis thaliana... 0.07 Archaeplastida
Zm00001e033521_P001 No alias CAX-interacting protein 4 OS=Arabidopsis thaliana... 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Neighborhood
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Neighborhood
BP GO:0000398 mRNA splicing, via spliceosome IEP Neighborhood
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003729 mRNA binding IEP Neighborhood
MF GO:0004860 protein kinase inhibitor activity IEP Neighborhood
MF GO:0004861 cyclin-dependent protein serine/threonine kinase inhibitor activity IEP Neighborhood
MF GO:0005096 GTPase activator activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005681 spliceosomal complex IEP Neighborhood
CC GO:0005685 U1 snRNP IEP Neighborhood
BP GO:0006376 mRNA splice site selection IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0007050 cell cycle arrest IEP Neighborhood
MF GO:0008047 enzyme activator activity IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP Neighborhood
BP GO:0018208 peptidyl-proline modification IEP Neighborhood
MF GO:0019207 kinase regulator activity IEP Neighborhood
MF GO:0019210 kinase inhibitor activity IEP Neighborhood
MF GO:0019887 protein kinase regulator activity IEP Neighborhood
BP GO:0022402 cell cycle process IEP Neighborhood
BP GO:0022618 ribonucleoprotein complex assembly IEP Neighborhood
MF GO:0030234 enzyme regulator activity IEP Neighborhood
MF GO:0030291 protein serine/threonine kinase inhibitor activity IEP Neighborhood
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Neighborhood
MF GO:0030695 GTPase regulator activity IEP Neighborhood
CC GO:0031011 Ino80 complex IEP Neighborhood
MF GO:0031072 heat shock protein binding IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
CC GO:0033202 DNA helicase complex IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044454 nuclear chromosome part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0045786 negative regulation of cell cycle IEP Neighborhood
BP GO:0048519 negative regulation of biological process IEP Neighborhood
BP GO:0048523 negative regulation of cellular process IEP Neighborhood
MF GO:0051082 unfolded protein binding IEP Neighborhood
BP GO:0051726 regulation of cell cycle IEP Neighborhood
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Neighborhood
MF GO:0061630 ubiquitin protein ligase activity IEP Neighborhood
MF GO:0061659 ubiquitin-like protein ligase activity IEP Neighborhood
CC GO:0070603 SWI/SNF superfamily-type complex IEP Neighborhood
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
CC GO:0097346 INO80-type complex IEP Neighborhood
CC GO:0097525 spliceosomal snRNP complex IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
CC GO:0120114 Sm-like protein family complex IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
CC GO:1904949 ATPase complex IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!