Coexpression cluster: Cluster_247 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0003676 nucleic acid binding 26.23% (16/61) 2.4 0.0 6e-06
GO:0003723 RNA binding 11.48% (7/61) 3.73 1e-06 9.6e-05
GO:0031011 Ino80 complex 3.28% (2/61) 8.54 9e-06 0.000312
GO:0033202 DNA helicase complex 3.28% (2/61) 8.54 9e-06 0.000312
GO:0097346 INO80-type complex 3.28% (2/61) 8.54 9e-06 0.000312
GO:0070603 SWI/SNF superfamily-type complex 3.28% (2/61) 8.54 9e-06 0.000312
GO:1904949 ATPase complex 3.28% (2/61) 8.13 1.9e-05 0.000534
GO:0044428 nuclear part 6.56% (4/61) 4.37 4.3e-05 0.001072
GO:0097159 organic cyclic compound binding 29.51% (18/61) 1.26 0.000275 0.004942
GO:1901363 heterocyclic compound binding 29.51% (18/61) 1.26 0.000275 0.004942
GO:0044454 nuclear chromosome part 3.28% (2/61) 6.43 0.000243 0.005341
GO:0016070 RNA metabolic process 8.2% (5/61) 2.79 0.000797 0.013154
GO:0005488 binding 37.7% (23/61) 0.91 0.001121 0.017067
GO:0016556 mRNA modification 1.64% (1/61) 9.13 0.00179 0.02363
GO:0080009 mRNA methylation 1.64% (1/61) 9.13 0.00179 0.02363
GO:0090304 nucleic acid metabolic process 8.2% (5/61) 2.42 0.002432 0.030097
GO:0006376 mRNA splice site selection 1.64% (1/61) 8.13 0.003577 0.037278
GO:0005685 U1 snRNP 1.64% (1/61) 8.13 0.003577 0.037278
GO:0006396 RNA processing 4.92% (3/61) 3.16 0.004703 0.040488
GO:0006528 asparagine metabolic process 1.64% (1/61) 7.54 0.005361 0.040827
GO:0006529 asparagine biosynthetic process 1.64% (1/61) 7.54 0.005361 0.040827
GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity 1.64% (1/61) 7.54 0.005361 0.040827
GO:0044446 intracellular organelle part 6.56% (4/61) 2.6 0.004344 0.040961
GO:0044422 organelle part 6.56% (4/61) 2.6 0.004344 0.040961
GO:0016071 mRNA metabolic process 3.28% (2/61) 4.32 0.004562 0.041057
GO:0034641 cellular nitrogen compound metabolic process 11.48% (7/61) 1.82 0.003533 0.041149
GO:0007050 cell cycle arrest 1.64% (1/61) 6.8 0.008919 0.045283
GO:0097525 spliceosomal snRNP complex 1.64% (1/61) 6.8 0.008919 0.045283
GO:0120114 Sm-like protein family complex 1.64% (1/61) 6.8 0.008919 0.045283
GO:0030532 small nuclear ribonucleoprotein complex 1.64% (1/61) 6.8 0.008919 0.045283
GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor 1.64% (1/61) 6.8 0.008919 0.045283
GO:0019210 kinase inhibitor activity 1.64% (1/61) 6.8 0.008919 0.045283
GO:0004860 protein kinase inhibitor activity 1.64% (1/61) 6.8 0.008919 0.045283
GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity 1.64% (1/61) 6.8 0.008919 0.045283
GO:0004861 cyclin-dependent protein serine/threonine kinase inhibitor activity 1.64% (1/61) 6.8 0.008919 0.045283
GO:0001510 RNA methylation 1.64% (1/61) 6.8 0.008919 0.045283
GO:0030291 protein serine/threonine kinase inhibitor activity 1.64% (1/61) 6.8 0.008919 0.045283
GO:0044424 intracellular part 11.48% (7/61) 1.54 0.01005 0.049748
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_22 0.019 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_36 0.029 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_38 0.022 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_83 0.031 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_116 0.025 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_126 0.022 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_165 0.019 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_168 0.019 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_193 0.024 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_232 0.02 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_258 0.034 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_27 0.02 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_67 0.021 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_74 0.029 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_132 0.021 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_133 0.024 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_185 0.023 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_196 0.031 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_211 0.029 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_269 0.023 Archaeplastida Compare
Gingko biloba HCCA Cluster_74 0.024 Archaeplastida Compare
Gingko biloba HCCA Cluster_93 0.02 Archaeplastida Compare
Gingko biloba HCCA Cluster_175 0.024 Archaeplastida Compare
Gingko biloba HCCA Cluster_324 0.024 Archaeplastida Compare
Gingko biloba HCCA Cluster_341 0.022 Archaeplastida Compare
Zea mays HCCA Cluster_1 0.02 Archaeplastida Compare
Zea mays HCCA Cluster_103 0.039 Archaeplastida Compare
Zea mays HCCA Cluster_188 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_256 0.025 Archaeplastida Compare
Zea mays HCCA Cluster_321 0.036 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_22 0.027 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_61 0.028 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_159 0.039 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_163 0.019 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_176 0.019 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_234 0.02 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_259 0.024 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_267 0.019 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_293 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_164 0.023 Archaeplastida Compare
Picea abies HCCA Cluster_277 0.022 Archaeplastida Compare
Picea abies HCCA Cluster_321 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_344 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_406 0.021 Archaeplastida Compare
Picea abies HCCA Cluster_412 0.028 Archaeplastida Compare
Picea abies HCCA Cluster_478 0.023 Archaeplastida Compare
Picea abies HCCA Cluster_492 0.027 Archaeplastida Compare
Picea abies HCCA Cluster_535 0.028 Archaeplastida Compare
Oryza sativa HCCA Cluster_96 0.029 Archaeplastida Compare
Oryza sativa HCCA Cluster_168 0.019 Archaeplastida Compare
Oryza sativa HCCA Cluster_174 0.019 Archaeplastida Compare
Oryza sativa HCCA Cluster_185 0.019 Archaeplastida Compare
Oryza sativa HCCA Cluster_241 0.02 Archaeplastida Compare
Oryza sativa HCCA Cluster_340 0.019 Archaeplastida Compare
Oryza sativa HCCA Cluster_346 0.025 Archaeplastida Compare
Oryza sativa HCCA Cluster_347 0.02 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_172 0.026 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_17 0.025 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_202 0.028 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_232 0.023 Archaeplastida Compare
Vitis vinifera HCCA Cluster_63 0.031 Archaeplastida Compare
Vitis vinifera HCCA Cluster_121 0.023 Archaeplastida Compare
Vitis vinifera HCCA Cluster_180 0.029 Archaeplastida Compare
Vitis vinifera HCCA Cluster_185 0.02 Archaeplastida Compare
Vitis vinifera HCCA Cluster_241 0.03 Archaeplastida Compare
Vitis vinifera HCCA Cluster_243 0.02 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_62 0.024 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_121 0.038 Archaeplastida Compare
Sequences (61) (download table)

InterPro Domains

GO Terms

Family Terms