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  5. AMTR_s00029p00052430

AMTR_s00029p00052430 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00029.43

No description available


Gene families : OG0002252 (Archaeplastida) Phylogenetic Tree(s): OG0002252_tree ,
OG_05_0001484 (LandPlants) Phylogenetic Tree(s): OG_05_0001484_tree ,
OG_06_0003579 (SeedPlants) Phylogenetic Tree(s): OG_06_0003579_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00029p00052430
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
AT3G01516 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.02 Archaeplastida
LOC_Os04g11860.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os12g42650.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp4g08850.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc01g006790.3.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc10g081700.3.1 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0004402 histone acetyltransferase activity IEP Neighborhood
MF GO:0004602 glutathione peroxidase activity IEP Neighborhood
MF GO:0005516 calmodulin binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005856 cytoskeleton IEP Neighborhood
BP GO:0006020 inositol metabolic process IEP Neighborhood
BP GO:0006066 alcohol metabolic process IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
BP GO:0006897 endocytosis IEP Neighborhood
BP GO:0006909 phagocytosis IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0007275 multicellular organism development IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0019205 nucleobase-containing compound kinase activity IEP Neighborhood
BP GO:0019310 inositol catabolic process IEP Neighborhood
BP GO:0019751 polyol metabolic process IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
MF GO:0034212 peptide N-acetyltransferase activity IEP Neighborhood
BP GO:0044275 cellular carbohydrate catabolic process IEP Neighborhood
BP GO:0044282 small molecule catabolic process IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0046164 alcohol catabolic process IEP Neighborhood
BP GO:0046174 polyol catabolic process IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood
MF GO:0050113 inositol oxygenase activity IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
MF GO:0051082 unfolded protein binding IEP Neighborhood
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Neighborhood
BP GO:0098657 import into cell IEP Neighborhood
BP GO:1901616 organic hydroxy compound catabolic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!