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  5. Solyc08g005810.1.1

Solyc08g005810.1.1


Description : pepsin-type protease


Gene families : OG0000010 (Archaeplastida) Phylogenetic Tree(s): OG0000010_tree ,
OG_05_0000177 (LandPlants) Phylogenetic Tree(s): OG_05_0000177_tree ,
OG_06_0000160 (SeedPlants) Phylogenetic Tree(s): OG_06_0000160_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g005810.1.1
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00162890 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.aspartic-type... 0.02 Archaeplastida
AMTR_s00057p00164580 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.aspartic-type... 0.02 Archaeplastida
AMTR_s00057p00166040 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.aspartic-type... 0.02 Archaeplastida
AMTR_s00061p00053670 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.aspartic-type... 0.03 Archaeplastida
AMTR_s00066p00181690 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.aspartic-type... 0.03 Archaeplastida
AMTR_s00095p00149910 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.aspartic-type... 0.02 Archaeplastida
AMTR_s00095p00154480 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.aspartic-type... 0.02 Archaeplastida
AMTR_s00095p00154910 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.aspartic-type... 0.02 Archaeplastida
AMTR_s00095p00155910 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.aspartic-type... 0.02 Archaeplastida
AMTR_s00095p00156630 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.aspartic-type... 0.02 Archaeplastida
AMTR_s00095p00166180 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.aspartic-type... 0.03 Archaeplastida
AMTR_s00095p00166460 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.aspartic-type... 0.02 Archaeplastida
AMTR_s00183p00040950 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.aspartic-type... 0.02 Archaeplastida
AT1G01300 No alias Eukaryotic aspartyl protease family protein 0.03 Archaeplastida
AT3G18490 No alias Eukaryotic aspartyl protease family protein 0.04 Archaeplastida
AT3G25700 No alias Eukaryotic aspartyl protease family protein 0.04 Archaeplastida
AT3G54400 No alias Eukaryotic aspartyl protease family protein 0.03 Archaeplastida
AT4G12920 No alias Eukaryotic aspartyl protease family protein 0.03 Archaeplastida
AT4G30030 No alias Eukaryotic aspartyl protease family protein 0.03 Archaeplastida
GSVIVT01008883001 No alias Protein degradation.peptidase families.aspartic-type... 0.05 Archaeplastida
GSVIVT01009155001 No alias Protein degradation.peptidase families.aspartic-type... 0.04 Archaeplastida
GSVIVT01010876001 No alias Protein degradation.peptidase families.aspartic-type... 0.03 Archaeplastida
GSVIVT01011932001 No alias Protein degradation.peptidase families.aspartic-type... 0.04 Archaeplastida
GSVIVT01036015001 No alias Protein degradation.peptidase families.aspartic-type... 0.02 Archaeplastida
Gb_02537 No alias pepsin-type protease 0.02 Archaeplastida
Gb_03093 No alias pepsin-type protease 0.03 Archaeplastida
Gb_06974 No alias pepsin-type protease 0.02 Archaeplastida
Gb_08122 No alias pepsin-type protease 0.04 Archaeplastida
Gb_08123 No alias pepsin-type protease 0.03 Archaeplastida
Gb_20719 No alias pepsin-type protease 0.04 Archaeplastida
Gb_20722 No alias pepsin-type protease 0.04 Archaeplastida
Gb_20896 No alias pepsin-type protease 0.03 Archaeplastida
Gb_22665 No alias pepsin-type protease 0.05 Archaeplastida
Gb_25235 No alias pepsin-type protease 0.03 Archaeplastida
Gb_25577 No alias pepsin-type protease 0.05 Archaeplastida
Gb_30498 No alias pepsin-type protease 0.03 Archaeplastida
LOC_Os01g04710.1 No alias pepsin-type protease 0.03 Archaeplastida
LOC_Os01g41550.1 No alias pepsin-type protease 0.03 Archaeplastida
LOC_Os04g58070.1 No alias pepsin-type protease 0.04 Archaeplastida
LOC_Os05g48330.1 No alias pepsin-type protease 0.03 Archaeplastida
LOC_Os05g51220.1 No alias pepsin-type protease 0.04 Archaeplastida
LOC_Os06g20040.1 No alias pepsin-type protease 0.04 Archaeplastida
LOC_Os06g20120.1 No alias pepsin-type protease 0.06 Archaeplastida
LOC_Os06g20140.1 No alias pepsin-type protease 0.06 Archaeplastida
LOC_Os06g20190.1 No alias pepsin-type protease 0.05 Archaeplastida
LOC_Os06g40818.1 No alias pepsin-type protease 0.05 Archaeplastida
LOC_Os07g34920.1 No alias pepsin-type protease 0.03 Archaeplastida
LOC_Os08g16660.1 No alias pepsin-type protease 0.04 Archaeplastida
MA_10431950g0010 No alias pepsin-type protease 0.02 Archaeplastida
MA_15755g0030 No alias pepsin-type protease 0.05 Archaeplastida
MA_19106g0010 No alias pepsin-type protease 0.02 Archaeplastida
MA_333359g0010 No alias pepsin-type protease 0.04 Archaeplastida
MA_495936g0010 No alias pepsin-type protease 0.02 Archaeplastida
MA_659259g0010 No alias pepsin-type protease 0.02 Archaeplastida
MA_7056790g0010 No alias No annotation 0.03 Archaeplastida
MA_86776g0010 No alias pepsin-type protease 0.04 Archaeplastida
MA_9830006g0010 No alias pepsin-type protease 0.02 Archaeplastida
Mp3g04530.1 No alias pepsin-type protease 0.03 Archaeplastida
Mp3g04580.1 No alias pepsin-type protease 0.03 Archaeplastida
Mp3g05040.1 No alias pepsin-type protease 0.02 Archaeplastida
Mp3g12890.1 No alias pepsin-type protease 0.02 Archaeplastida
Mp5g12100.1 No alias pepsin-type protease 0.03 Archaeplastida
Mp5g16410.1 No alias pepsin-type protease 0.03 Archaeplastida
Mp5g16420.1 No alias pepsin-type protease 0.03 Archaeplastida
Mp6g08230.1 No alias pepsin-type protease 0.02 Archaeplastida
Mp6g08240.1 No alias pepsin-type protease 0.04 Archaeplastida
Mp7g10640.1 No alias pepsin-type protease 0.03 Archaeplastida
Mp7g12400.1 No alias pepsin-type protease 0.03 Archaeplastida
Mp7g12410.1 No alias pepsin-type protease 0.03 Archaeplastida
Pp3c18_3870V3.1 No alias Eukaryotic aspartyl protease family protein 0.03 Archaeplastida
Pp3c18_5530V3.1 No alias Eukaryotic aspartyl protease family protein 0.02 Archaeplastida
Pp3c19_10740V3.1 No alias Eukaryotic aspartyl protease family protein 0.03 Archaeplastida
Pp3c22_22040V3.1 No alias Eukaryotic aspartyl protease family protein 0.02 Archaeplastida
Pp3c26_9030V3.1 No alias Eukaryotic aspartyl protease family protein 0.05 Archaeplastida
Pp3c2_21330V3.1 No alias Eukaryotic aspartyl protease family protein 0.03 Archaeplastida
Pp3c3_17600V3.1 No alias Eukaryotic aspartyl protease family protein 0.02 Archaeplastida
Pp3c7_23300V3.1 No alias Eukaryotic aspartyl protease family protein 0.06 Archaeplastida
Smo64135 No alias Protein degradation.peptidase families.aspartic-type... 0.03 Archaeplastida
Smo64201 No alias Protein degradation.peptidase families.aspartic-type... 0.03 Archaeplastida
Solyc02g005601.1.1 No alias pepsin-type protease 0.04 Archaeplastida
Solyc06g069220.1.1 No alias pepsin-type protease 0.03 Archaeplastida
Solyc08g005820.1.1 No alias pepsin-type protease 0.08 Archaeplastida
Solyc08g005830.1.1 No alias pepsin-type protease 0.09 Archaeplastida
Zm00001e008989_P002 No alias pepsin-type protease 0.02 Archaeplastida
Zm00001e009925_P001 No alias pepsin-type protease 0.04 Archaeplastida
Zm00001e020616_P001 No alias pepsin-type protease 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
MF GO:0008146 sulfotransferase activity IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR032799 TAXi_C 246 385
IPR032861 TAXi_N 87 225
No external refs found!