Solyc08g007140.4.1


Description : component RPL37a of LSU proteome component


Gene families : OG0001934 (Archaeplastida) Phylogenetic Tree(s): OG0001934_tree ,
OG_05_0002267 (LandPlants) Phylogenetic Tree(s): OG_05_0002267_tree ,
OG_06_0030183 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g007140.4.1
Cluster HCCA: Cluster_155

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000718.64 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 Archaeplastida
Cre06.g257150 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 Archaeplastida
Gb_13072 No alias component RPL37a of LSU proteome component 0.04 Archaeplastida
LOC_Os01g48770.2 No alias component RPL37a of LSU proteome component 0.05 Archaeplastida
LOC_Os05g48320.1 No alias component RPL37a of LSU proteome component 0.03 Archaeplastida
MA_320643g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_4732g0010 No alias component RPL37a of LSU proteome component 0.02 Archaeplastida
Mp5g09590.1 No alias component RPL37a of LSU proteome component 0.02 Archaeplastida
Pp3c11_2550V3.1 No alias Zinc-binding ribosomal protein family protein 0.03 Archaeplastida
Pp3c1_1530V3.1 No alias Zinc-binding ribosomal protein family protein 0.03 Archaeplastida
Pp3c2_34770V3.1 No alias Zinc-binding ribosomal protein family protein 0.02 Archaeplastida
Pp3c7_21150V3.1 No alias Zinc-binding ribosomal protein family protein 0.04 Archaeplastida
Smo227221 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 Archaeplastida
Solyc08g077710.3.1 No alias component RPL37a of LSU proteome component 0.02 Archaeplastida
Zm00001e013684_P001 No alias component RPL37a of LSU proteome component 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Type GO Term Name Evidence Source
CC GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) IEP Neighborhood
CC GO:0000930 gamma-tubulin complex IEP Neighborhood
CC GO:0000931 gamma-tubulin large complex IEP Neighborhood
BP GO:0001522 pseudouridine synthesis IEP Neighborhood
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Neighborhood
BP GO:0006351 transcription, DNA-templated IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
CC GO:0008274 gamma-tubulin ring complex IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
MF GO:0016779 nucleotidyltransferase activity IEP Neighborhood
BP GO:0018130 heterocycle biosynthetic process IEP Neighborhood
BP GO:0019438 aromatic compound biosynthetic process IEP Neighborhood
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Neighborhood
MF GO:0030515 snoRNA binding IEP Neighborhood
BP GO:0031503 protein-containing complex localization IEP Neighborhood
BP GO:0032774 RNA biosynthetic process IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
BP GO:0033566 gamma-tubulin complex localization IEP Neighborhood
MF GO:0034062 5'-3' RNA polymerase activity IEP Neighborhood
BP GO:0034613 cellular protein localization IEP Neighborhood
BP GO:0034629 cellular protein-containing complex localization IEP Neighborhood
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Neighborhood
BP GO:0042254 ribosome biogenesis IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044430 cytoskeletal part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044450 microtubule organizing center part IEP Neighborhood
CC GO:0044455 mitochondrial membrane part IEP Neighborhood
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0070727 cellular macromolecule localization IEP Neighborhood
BP GO:0097659 nucleic acid-templated transcription IEP Neighborhood
MF GO:0097747 RNA polymerase activity IEP Neighborhood
CC GO:0098798 mitochondrial protein complex IEP Neighborhood
CC GO:0098800 inner mitochondrial membrane protein complex IEP Neighborhood
BP GO:1901362 organic cyclic compound biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR002674 Ribosomal_L37ae 1 60
No external refs found!