Solyc08g008305.1.1

Description : transcription factor (DREB)

Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000001 (LandPlants) Phylogenetic Tree(s): OG_05_0000001_tree ,
OG_06_0000007 (SeedPlants) Phylogenetic Tree(s): OG_06_0000007_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc08g008305.1.1
Cluster	HCCA: Cluster_186

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00021p00185480	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
AT1G21910	DREB26	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT1G64380	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT5G11590	TINY2	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
AT5G61590	No alias	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
GSVIVT01009007001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01028312001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
LOC_Os03g08460.1	No alias	Ethylene-responsive transcription factor ERF073...	0.02	Archaeplastida
LOC_Os04g46240.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os10g22600.1	No alias	transcription factor (DREB)	0.09	Archaeplastida
MA_364562g0010	No alias	transcription factor (DREB)	0.06	Archaeplastida
MA_436575g0010	No alias	no hits & (original description: none)	0.05	Archaeplastida
Solyc03g005500.1.1	No alias	transcription factor (ERF). transcription factor (DREB)	0.03	Archaeplastida
Solyc03g118190.4.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
Solyc08g078170.1.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
Solyc09g066360.1.1	No alias	transcription factor (ERF)	0.05	Archaeplastida
Zm00001e031783_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e033537_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0008037	cell recognition	IEP	Neighborhood
CC	GO:0009507	chloroplast	IEP	Neighborhood
CC	GO:0009536	plastid	IEP	Neighborhood
BP	GO:0022414	reproductive process	IEP	Neighborhood
BP	GO:0048544	recognition of pollen	IEP	Neighborhood
MF	GO:0051536	iron-sulfur cluster binding	IEP	Neighborhood
MF	GO:0051540	metal cluster binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	131	180

External Links

No external refs found!

Solyc08g008305.1.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation