Solyc08g013700.1.1

Description : transcription factor (RAV/NGATHA)

Gene families : OG0000363 (Archaeplastida) Phylogenetic Tree(s): OG0000363_tree ,
OG_05_0000191 (LandPlants) Phylogenetic Tree(s): OG_05_0000191_tree ,
OG_06_0000986 (SeedPlants) Phylogenetic Tree(s): OG_06_0000986_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc08g013700.1.1
Cluster	HCCA: Cluster_13

Target	Alias	Description	ECC score	Gene Family Method
GSVIVT01019699001	No alias	RNA biosynthesis.transcriptional activation.B3...	0.05	Archaeplastida
MA_18923g0010	No alias	transcription factor (RAV/NGATHA). transcription factor (AP2-RAV)	0.04	Archaeplastida
MA_865117g0010	No alias	transcription factor (RAV/NGATHA). transcription factor (AP2-RAV)	0.03	Archaeplastida
Zm00001e023240_P001	No alias	transcription factor (RAV/NGATHA)	0.03	Archaeplastida
Zm00001e024165_P001	No alias	transcription factor (RAV/NGATHA)	0.04	Archaeplastida
Zm00001e040214_P001	No alias	transcription factor (RAV/NGATHA)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004650	polygalacturonase activity	IEP	Neighborhood
CC	GO:0005783	endoplasmic reticulum	IEP	Neighborhood
MF	GO:0046983	protein dimerization activity	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003340	B3_DNA-bd	55	160

External Links

No external refs found!