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  5. Solyc08g028690.4.1

Solyc08g028690.4.1


Description : Secoisolariciresinol dehydrogenase (Fragment) OS=Forsythia intermedia (sp|q94kl7|sild_forin : 256.0)


Gene families : OG0000154 (Archaeplastida) Phylogenetic Tree(s): OG0000154_tree ,
OG_05_0000088 (LandPlants) Phylogenetic Tree(s): OG_05_0000088_tree ,
OG_06_0000092 (SeedPlants) Phylogenetic Tree(s): OG_06_0000092_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g028690.4.1

Target Alias Description ECC score Gene Family Method Actions
AT2G47140 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.01 Archaeplastida
Gb_07847 No alias Momilactone A synthase OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Gb_11757 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.02 Archaeplastida
Gb_29691 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.02 Archaeplastida
Gb_32338 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.02 Archaeplastida
Gb_32339 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.02 Archaeplastida
MA_57399g0010 No alias Short-chain dehydrogenase reductase ATA1 OS=Arabidopsis... 0.11 Archaeplastida
Smo229892 No alias Momilactone A synthase OS=Oryza sativa subsp. japonica 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004852 uroporphyrinogen-III synthase activity IEP Neighborhood
MF GO:0016829 lyase activity IEP Neighborhood
MF GO:0016835 carbon-oxygen lyase activity IEP Neighborhood
MF GO:0016836 hydro-lyase activity IEP Neighborhood
BP GO:0018130 heterocycle biosynthetic process IEP Neighborhood
BP GO:0019438 aromatic compound biosynthetic process IEP Neighborhood
BP GO:0033013 tetrapyrrole metabolic process IEP Neighborhood
BP GO:0033014 tetrapyrrole biosynthetic process IEP Neighborhood
MF GO:0051536 iron-sulfur cluster binding IEP Neighborhood
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Neighborhood
MF GO:0051540 metal cluster binding IEP Neighborhood
BP GO:1901362 organic cyclic compound biosynthetic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!