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  5. Solyc08g061410.3.1

Solyc08g061410.3.1


Description : RDR2-polymerase regulator protein CLSY3/4


Gene families : OG0000450 (Archaeplastida) Phylogenetic Tree(s): OG0000450_tree ,
OG_05_0000597 (LandPlants) Phylogenetic Tree(s): OG_05_0000597_tree ,
OG_06_0000338 (SeedPlants) Phylogenetic Tree(s): OG_06_0000338_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g061410.3.1
Cluster HCCA: Cluster_190

Target Alias Description ECC score Gene Family Method Actions
Solyc01g068293.1.1 No alias RDR2-polymerase regulator protein CLSY3/4 0.05 Archaeplastida
Solyc02g033050.3.1 No alias RDR2-polymerase regulator protein CLSY3/4 0.09 Archaeplastida
Solyc06g050510.3.1 No alias RDR2-polymerase accessory protein (CLSY1/2) 0.03 Archaeplastida
Solyc08g061400.1.1 No alias SNF2 domain-containing protein CLASSY 3 OS=Arabidopsis... 0.07 Archaeplastida
Solyc08g062050.1.1 No alias SNF2 domain-containing protein CLASSY 3 OS=Arabidopsis... 0.13 Archaeplastida
Solyc08g077640.3.1 No alias no hits & (original description: none) 0.07 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004867 serine-type endopeptidase inhibitor activity IEP Neighborhood
MF GO:0008146 sulfotransferase activity IEP Neighborhood
BP GO:0009611 response to wounding IEP Neighborhood
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Neighborhood
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Neighborhood
InterPro domains Description Start Stop
IPR001650 Helicase_C 284 386
IPR000330 SNF2_N 102 229
No external refs found!