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  5. AMTR_s00029p00116980

AMTR_s00029p00116980 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00029.129

Description : U-box domain-containing protein 62 OS=Arabidopsis thaliana


Gene families : OG0000936 (Archaeplastida) Phylogenetic Tree(s): OG0000936_tree ,
OG_05_0005352 (LandPlants) Phylogenetic Tree(s): OG_05_0005352_tree ,
OG_06_0007200 (SeedPlants) Phylogenetic Tree(s): OG_06_0007200_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00029p00116980
Cluster HCCA: Cluster_213

Target Alias Description ECC score Gene Family Method Actions
Gb_03616 No alias U-box domain-containing protein 62 OS=Arabidopsis... 0.02 Archaeplastida
Gb_06756 No alias U-box domain-containing protein 62 OS=Arabidopsis... 0.02 Archaeplastida
MA_1898g0010 No alias U-box domain-containing protein 62 OS=Arabidopsis... 0.04 Archaeplastida
Pp3c12_23350V3.1 No alias RING/U-box superfamily protein 0.02 Archaeplastida
Solyc04g009340.3.1 No alias U-box domain-containing protein 63 OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e010423_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e016277_P001 No alias U-box domain-containing protein 63 OS=Arabidopsis... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Neighborhood
BP GO:0000097 sulfur amino acid biosynthetic process IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003689 DNA clamp loader activity IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0004379 glycylpeptide N-tetradecanoyltransferase activity IEP Neighborhood
MF GO:0004427 inorganic diphosphatase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
CC GO:0005663 DNA replication factor C complex IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
BP GO:0006534 cysteine metabolic process IEP Neighborhood
BP GO:0006535 cysteine biosynthetic process from serine IEP Neighborhood
BP GO:0006563 L-serine metabolic process IEP Neighborhood
MF GO:0008094 DNA-dependent ATPase activity IEP Neighborhood
MF GO:0008374 O-acyltransferase activity IEP Neighborhood
MF GO:0009001 serine O-acetyltransferase activity IEP Neighborhood
BP GO:0009069 serine family amino acid metabolic process IEP Neighborhood
BP GO:0009070 serine family amino acid biosynthetic process IEP Neighborhood
MF GO:0009678 hydrogen-translocating pyrophosphatase activity IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
MF GO:0016412 serine O-acyltransferase activity IEP Neighborhood
MF GO:0016413 O-acetyltransferase activity IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016597 amino acid binding IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0019107 myristoyltransferase activity IEP Neighborhood
BP GO:0019344 cysteine biosynthetic process IEP Neighborhood
MF GO:0031406 carboxylic acid binding IEP Neighborhood
MF GO:0033170 protein-DNA loading ATPase activity IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
MF GO:0043177 organic acid binding IEP Neighborhood
BP GO:0044272 sulfur compound biosynthetic process IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!