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  5. Solyc08g061630.3.1

Solyc08g061630.3.1


Description : YlmG homolog protein 2, chloroplastic OS=Arabidopsis thaliana (sp|q9c595|ylmg2_arath : 190.0)


Gene families : OG0001615 (Archaeplastida) Phylogenetic Tree(s): OG0001615_tree ,
OG_05_0007111 (LandPlants) Phylogenetic Tree(s): OG_05_0007111_tree ,
OG_06_0008584 (SeedPlants) Phylogenetic Tree(s): OG_06_0008584_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g061630.3.1
Cluster HCCA: Cluster_224

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00238310 evm_27.TU.AmTr_v1... YlmG homolog protein 2, chloroplastic OS=Arabidopsis thaliana 0.06 Archaeplastida
AT5G21920 YLMG2, ATYLMG2 YGGT family protein 0.13 Archaeplastida
Cre02.g080250 No alias No description available 0.04 Archaeplastida
Cre12.g557050 No alias YlmG homolog protein 2, chloroplastic OS=Arabidopsis thaliana 0.06 Archaeplastida
Cre16.g684300 No alias No description available 0.04 Archaeplastida
GSVIVT01035473001 No alias YlmG homolog protein 2, chloroplastic OS=Arabidopsis thaliana 0.04 Archaeplastida
Gb_33767 No alias YlmG homolog protein 2, chloroplastic OS=Arabidopsis... 0.08 Archaeplastida
LOC_Os03g08080.1 No alias YlmG homolog protein 2, chloroplastic OS=Arabidopsis... 0.11 Archaeplastida
MA_9458287g0010 No alias YlmG homolog protein 2, chloroplastic OS=Arabidopsis... 0.05 Archaeplastida
Mp3g13060.1 No alias YlmG homolog protein 2, chloroplastic OS=Arabidopsis... 0.11 Archaeplastida
Mp8g11810.1 No alias no hits & (original description: none) 0.06 Archaeplastida
Pp3c3_30150V3.1 No alias YGGT family protein 0.04 Archaeplastida
Smo438165 No alias YlmG homolog protein 1-2, chloroplastic OS=Arabidopsis thaliana 0.02 Archaeplastida
Zm00001e000570_P001 No alias YlmG homolog protein 2, chloroplastic OS=Arabidopsis... 0.08 Archaeplastida
Zm00001e038876_P002 No alias no hits & (original description: none) 0.1 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
MF GO:0004197 cysteine-type endopeptidase activity IEP Neighborhood
MF GO:0004427 inorganic diphosphatase activity IEP Neighborhood
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Neighborhood
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
CC GO:0005840 ribosome IEP Neighborhood
BP GO:0006399 tRNA metabolic process IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
BP GO:0006418 tRNA aminoacylation for protein translation IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
BP GO:0006520 cellular amino acid metabolic process IEP Neighborhood
BP GO:0006778 porphyrin-containing compound metabolic process IEP Neighborhood
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
CC GO:0009512 cytochrome b6f complex IEP Neighborhood
CC GO:0009521 photosystem IEP Neighborhood
CC GO:0009523 photosystem II IEP Neighborhood
CC GO:0009654 photosystem II oxygen evolving complex IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0015979 photosynthesis IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
BP GO:0016485 protein processing IEP Neighborhood
MF GO:0016853 isomerase activity IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0019829 cation-transporting ATPase activity IEP Neighborhood
CC GO:0019898 extrinsic component of membrane IEP Neighborhood
MF GO:0022853 active ion transmembrane transporter activity IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0033014 tetrapyrrole biosynthetic process IEP Neighborhood
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
MF GO:0042625 ATPase coupled ion transmembrane transporter activity IEP Neighborhood
BP GO:0043038 amino acid activation IEP Neighborhood
BP GO:0043039 tRNA aminoacylation IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044436 thylakoid part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP Neighborhood
CC GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) IEP Neighborhood
BP GO:0045454 cell redox homeostasis IEP Neighborhood
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP Neighborhood
BP GO:0051604 protein maturation IEP Neighborhood
MF GO:0051920 peroxiredoxin activity IEP Neighborhood
CC GO:0070069 cytochrome complex IEP Neighborhood
BP GO:0071586 CAAX-box protein processing IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
MF GO:0140101 catalytic activity, acting on a tRNA IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
BP GO:1901566 organonitrogen compound biosynthetic process IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR003425 CCB3/YggT 133 196
No external refs found!