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  5. Solyc08g065820.3.1

Solyc08g065820.3.1


Description : histone demethylase (KDM3). transcription factor (JUMONJI)


Gene families : OG0000515 (Archaeplastida) Phylogenetic Tree(s): OG0000515_tree ,
OG_05_0000563 (LandPlants) Phylogenetic Tree(s): OG_05_0000563_tree ,
OG_06_0000492 (SeedPlants) Phylogenetic Tree(s): OG_06_0000492_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g065820.3.1
Cluster HCCA: Cluster_131

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01027160001 No alias RNA biosynthesis.transcriptional activation.JUMONJI... 0.04 Archaeplastida
GSVIVT01031114001 No alias RNA biosynthesis.transcriptional activation.JUMONJI... 0.03 Archaeplastida
GSVIVT01031115001 No alias Lysine-specific demethylase JMJ25 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01038553001 No alias RNA biosynthesis.transcriptional activation.JUMONJI... 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005086 ARF guanyl-nucleotide exchange factor activity IEP Neighborhood
BP GO:0009966 regulation of signal transduction IEP Neighborhood
BP GO:0010646 regulation of cell communication IEP Neighborhood
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Neighborhood
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
BP GO:0023051 regulation of signaling IEP Neighborhood
BP GO:0032012 regulation of ARF protein signal transduction IEP Neighborhood
BP GO:0046578 regulation of Ras protein signal transduction IEP Neighborhood
BP GO:0048583 regulation of response to stimulus IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Neighborhood
BP GO:1902531 regulation of intracellular signal transduction IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!