Solyc08g068370.3.1


Description : TOM endomembrane trafficking associated protein


Gene families : OG0000369 (Archaeplastida) Phylogenetic Tree(s): OG0000369_tree ,
OG_05_0000606 (LandPlants) Phylogenetic Tree(s): OG_05_0000606_tree ,
OG_06_0001299 (SeedPlants) Phylogenetic Tree(s): OG_06_0001299_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g068370.3.1
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00130p00102230 evm_27.TU.AmTr_v1... Vesicle trafficking.endomembrane trafficking.protein... 0.03 Archaeplastida
AT4G32760 No alias ENTH/VHS/GAT family protein 0.04 Archaeplastida
AT5G16880 No alias Target of Myb protein 1 0.04 Archaeplastida
GSVIVT01035657001 No alias Vesicle trafficking.endomembrane trafficking.protein... 0.04 Archaeplastida
LOC_Os01g12880.1 No alias TOM endomembrane trafficking associated protein 0.03 Archaeplastida
LOC_Os05g39760.1 No alias TOM endomembrane trafficking associated protein 0.02 Archaeplastida
LOC_Os06g22650.1 No alias TOM endomembrane trafficking associated protein 0.03 Archaeplastida
MA_10426607g0010 No alias Hexokinase-2 OS=Solanum tuberosum (sp|q9sq76|hxk2_soltu : 105.0) 0.03 Archaeplastida
MA_12709g0010 No alias TOM endomembrane trafficking associated protein 0.02 Archaeplastida
Pp3c23_19630V3.1 No alias ENTH/VHS/GAT family protein 0.03 Archaeplastida
Smo67275 No alias Vesicle trafficking.endomembrane trafficking.protein... 0.03 Archaeplastida
Smo82329 No alias Vesicle trafficking.endomembrane trafficking.protein... 0.02 Archaeplastida
Zm00001e011075_P001 No alias TOM endomembrane trafficking associated protein 0.02 Archaeplastida
Zm00001e019421_P001 No alias TOM endomembrane trafficking associated protein 0.02 Archaeplastida
Zm00001e026110_P002 No alias TOM endomembrane trafficking associated protein 0.03 Archaeplastida
Zm00001e037022_P001 No alias TOM endomembrane trafficking associated protein 0.03 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0004806 triglyceride lipase activity IEP Neighborhood
MF GO:0005047 signal recognition particle binding IEP Neighborhood
MF GO:0005096 GTPase activator activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
CC GO:0005667 transcription factor complex IEP Neighborhood
CC GO:0005672 transcription factor TFIIA complex IEP Neighborhood
CC GO:0005785 signal recognition particle receptor complex IEP Neighborhood
BP GO:0006352 DNA-templated transcription, initiation IEP Neighborhood
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Neighborhood
BP GO:0006605 protein targeting IEP Neighborhood
BP GO:0006612 protein targeting to membrane IEP Neighborhood
BP GO:0006613 cotranslational protein targeting to membrane IEP Neighborhood
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Neighborhood
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Neighborhood
MF GO:0008047 enzyme activator activity IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0016298 lipase activity IEP Neighborhood
MF GO:0016409 palmitoyltransferase activity IEP Neighborhood
BP GO:0017003 protein-heme linkage IEP Neighborhood
BP GO:0017004 cytochrome complex assembly IEP Neighborhood
BP GO:0017006 protein-tetrapyrrole linkage IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030127 COPII vesicle coat IEP Neighborhood
MF GO:0030234 enzyme regulator activity IEP Neighborhood
CC GO:0030677 ribonuclease P complex IEP Neighborhood
MF GO:0030695 GTPase regulator activity IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0033365 protein localization to organelle IEP Neighborhood
BP GO:0034613 cellular protein localization IEP Neighborhood
MF GO:0035091 phosphatidylinositol binding IEP Neighborhood
MF GO:0043021 ribonucleoprotein complex binding IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044798 nuclear transcription factor complex IEP Neighborhood
MF GO:0044877 protein-containing complex binding IEP Neighborhood
BP GO:0045047 protein targeting to ER IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Neighborhood
BP GO:0070727 cellular macromolecule localization IEP Neighborhood
BP GO:0070972 protein localization to endoplasmic reticulum IEP Neighborhood
BP GO:0072594 establishment of protein localization to organelle IEP Neighborhood
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Neighborhood
BP GO:0072657 protein localization to membrane IEP Neighborhood
BP GO:0090150 establishment of protein localization to membrane IEP Neighborhood
CC GO:0090575 RNA polymerase II transcription factor complex IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
CC GO:1902555 endoribonuclease complex IEP Neighborhood
CC GO:1905348 endonuclease complex IEP Neighborhood
InterPro domains Description Start Stop
IPR002014 VHS_dom 3 121
IPR004152 GAT_dom 195 269
No external refs found!