1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc08g074570.1.1

Solyc08g074570.1.1


Description : component MOS2 of non-snRNP MOS4-associated complex


Gene families : OG0004905 (Archaeplastida) Phylogenetic Tree(s): OG0004905_tree ,
OG_05_0004570 (LandPlants) Phylogenetic Tree(s): OG_05_0004570_tree ,
OG_06_0005390 (SeedPlants) Phylogenetic Tree(s): OG_06_0005390_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g074570.1.1
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00018p00151280 evm_27.TU.AmTr_v1... RNA processing.RNA splicing.spliceosome-associated... 0.02 Archaeplastida
AT1G33520 MOS2 D111/G-patch domain-containing protein 0.1 Archaeplastida
AT4G25020 No alias D111/G-patch domain-containing protein 0.03 Archaeplastida
LOC_Os03g14860.1 No alias component MOS2 of non-snRNP MOS4-associated complex 0.04 Archaeplastida
MA_10433024g0010 No alias component MOS2 of non-snRNP MOS4-associated complex 0.04 Archaeplastida
Mp5g05110.1 No alias component MOS2 of non-snRNP MOS4-associated complex 0.07 Archaeplastida
Pp3c1_630V3.1 No alias D111/G-patch domain-containing protein 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Neighborhood
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Neighborhood
BP GO:0000398 mRNA splicing, via spliceosome IEP Neighborhood
MF GO:0003682 chromatin binding IEP Neighborhood
BP GO:0006364 rRNA processing IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
BP GO:0016072 rRNA metabolic process IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR026822 Spp2/MOS2_G-patch 153 210
No external refs found!