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  5. Solyc08g076210.3.1

Solyc08g076210.3.1


Description : Secretory carrier-associated membrane protein 4 OS=Arabidopsis thaliana (sp|q9c6x2|scam4_arath : 376.0)


Gene families : OG0000869 (Archaeplastida) Phylogenetic Tree(s): OG0000869_tree ,
OG_05_0000831 (LandPlants) Phylogenetic Tree(s): OG_05_0000831_tree ,
OG_06_0000621 (SeedPlants) Phylogenetic Tree(s): OG_06_0000621_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g076210.3.1
Cluster HCCA: Cluster_206

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01030566001 No alias Secretory carrier-associated membrane protein 1... 0.03 Archaeplastida
Gb_06348 No alias Secretory carrier-associated membrane protein 1 OS=Oryza... 0.03 Archaeplastida
LOC_Os02g47010.1 No alias Secretory carrier-associated membrane protein 5 OS=Oryza... 0.04 Archaeplastida
LOC_Os05g42330.1 No alias Secretory carrier-associated membrane protein 3 OS=Oryza... 0.06 Archaeplastida
MA_10426067g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_8570231g0010 No alias Secretory carrier-associated membrane protein 1... 0.03 Archaeplastida
Zm00001e015529_P002 No alias Secretory carrier-associated membrane protein 6 OS=Oryza... 0.04 Archaeplastida
Zm00001e027375_P001 No alias Secretory carrier-associated membrane protein 3 OS=Oryza... 0.02 Archaeplastida
Zm00001e041560_P001 No alias Secretory carrier-associated membrane protein 6 OS=Oryza... 0.04 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0015031 protein transport IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Neighborhood
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP Neighborhood
CC GO:0005739 mitochondrion IEP Neighborhood
CC GO:0005783 endoplasmic reticulum IEP Neighborhood
CC GO:0005789 endoplasmic reticulum membrane IEP Neighborhood
BP GO:0006486 protein glycosylation IEP Neighborhood
MF GO:0008509 anion transmembrane transporter activity IEP Neighborhood
MF GO:0015098 molybdate ion transmembrane transporter activity IEP Neighborhood
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Neighborhood
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP Neighborhood
BP GO:0015689 molybdate ion transport IEP Neighborhood
BP GO:0015698 inorganic anion transport IEP Neighborhood
BP GO:0015780 nucleotide-sugar transmembrane transport IEP Neighborhood
BP GO:0015931 nucleobase-containing compound transport IEP Neighborhood
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
CC GO:0031090 organelle membrane IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0043413 macromolecule glycosylation IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044431 Golgi apparatus part IEP Neighborhood
CC GO:0044432 endoplasmic reticulum part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0070085 glycosylation IEP Neighborhood
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP Neighborhood
CC GO:0098588 bounding membrane of organelle IEP Neighborhood
BP GO:1901264 carbohydrate derivative transport IEP Neighborhood
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Neighborhood
InterPro domains Description Start Stop
IPR007273 SCAMP 64 234
No external refs found!