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  5. Solyc08g076340.3.1

Solyc08g076340.3.1


Description : component RPS30 of SSU proteome


Gene families : OG0003752 (Archaeplastida) Phylogenetic Tree(s): OG0003752_tree ,
OG_05_0003387 (LandPlants) Phylogenetic Tree(s): OG_05_0003387_tree ,
OG_06_0004145 (SeedPlants) Phylogenetic Tree(s): OG_06_0004145_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g076340.3.1
Cluster HCCA: Cluster_155

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00068p00064720 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.09 Archaeplastida
AT2G19750 No alias Ribosomal protein S30 family protein 0.04 Archaeplastida
AT4G29390 No alias Ribosomal protein S30 family protein 0.03 Archaeplastida
AT5G56670 No alias Ribosomal protein S30 family protein 0.03 Archaeplastida
Cpa|evm.model.tig00001003.33 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.06 Archaeplastida
Cre16.g666301 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.14 Archaeplastida
GSVIVT01016902001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.07 Archaeplastida
Gb_23464 No alias component RPS30 of SSU proteome 0.05 Archaeplastida
LOC_Os06g07580.1 No alias component RPS30 of SSU proteome 0.04 Archaeplastida
MA_10432727g0010 No alias component RPS30 of SSU proteome 0.07 Archaeplastida
Mp2g24290.1 No alias component RPS30 of SSU proteome 0.06 Archaeplastida
Mp8g09080.1 No alias component RPS30 of SSU proteome 0.05 Archaeplastida
Pp3c1_420V3.1 No alias Ribosomal protein S30 family protein 0.07 Archaeplastida
Pp3c2_29010V3.1 No alias Ribosomal protein S30 family protein 0.16 Archaeplastida
Pp3c7_26650V3.1 No alias Ribosomal protein S30 family protein 0.04 Archaeplastida
Smo227173 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006333 chromatin assembly or disassembly IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
CC GO:0016272 prefoldin complex IEP Neighborhood
MF GO:0051082 unfolded protein binding IEP Neighborhood
InterPro domains Description Start Stop
IPR006846 Ribosomal_S30 3 59
No external refs found!