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  5. Solyc08g076860.3.1

Solyc08g076860.3.1


Description : transcription factor (PLATZ)


Gene families : OG0000197 (Archaeplastida) Phylogenetic Tree(s): OG0000197_tree ,
OG_05_0000533 (LandPlants) Phylogenetic Tree(s): OG_05_0000533_tree ,
OG_06_0001021 (SeedPlants) Phylogenetic Tree(s): OG_06_0001021_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g076860.3.1
Cluster HCCA: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00211460 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.PLATZ... 0.05 Archaeplastida
AMTR_s00059p00116150 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.PLATZ... 0.02 Archaeplastida
AT2G12646 No alias PLATZ transcription factor family protein 0.02 Archaeplastida
AT5G46710 No alias PLATZ transcription factor family protein 0.03 Archaeplastida
GSVIVT01004782001 No alias RNA biosynthesis.transcriptional activation.PLATZ... 0.05 Archaeplastida
GSVIVT01012125001 No alias RNA biosynthesis.transcriptional activation.PLATZ... 0.06 Archaeplastida
GSVIVT01012869001 No alias RNA biosynthesis.transcriptional activation.PLATZ... 0.03 Archaeplastida
GSVIVT01013149001 No alias RNA biosynthesis.transcriptional activation.PLATZ... 0.04 Archaeplastida
LOC_Os02g07650.1 No alias transcription factor (PLATZ) 0.03 Archaeplastida
LOC_Os04g50120.1 No alias transcription factor (PLATZ) 0.04 Archaeplastida
LOC_Os06g41930.2 No alias transcription factor (PLATZ) 0.02 Archaeplastida
LOC_Os10g42410.3 No alias transcription factor (PLATZ) 0.02 Archaeplastida
MA_10310g0010 No alias transcription factor (PLATZ) 0.02 Archaeplastida
MA_4953568g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Pp3c13_4760V3.1 No alias PLATZ transcription factor family protein 0.03 Archaeplastida
Pp3c15_23190V3.1 No alias PLATZ transcription factor family protein 0.02 Archaeplastida
Smo102589 No alias RNA biosynthesis.transcriptional activation.PLATZ... 0.02 Archaeplastida
Solyc07g007320.3.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc12g010470.3.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e002426_P001 No alias transcription factor (PLATZ) 0.03 Archaeplastida
Zm00001e007100_P003 No alias transcription factor (PLATZ) 0.04 Archaeplastida
Zm00001e013865_P001 No alias transcription factor (PLATZ) 0.02 Archaeplastida
Zm00001e041404_P001 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0004197 cysteine-type endopeptidase activity IEP Neighborhood
MF GO:0004869 cysteine-type endopeptidase inhibitor activity IEP Neighborhood
MF GO:0005096 GTPase activator activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0007034 vacuolar transport IEP Neighborhood
MF GO:0008047 enzyme activator activity IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
MF GO:0030234 enzyme regulator activity IEP Neighborhood
MF GO:0030695 GTPase regulator activity IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050790 regulation of catalytic activity IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0065009 regulation of molecular function IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR006734 DUF597 69 140
No external refs found!