1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc08g078690.3.1

Solyc08g078690.3.1


Description : contact site protein (VAP27) of ER-cytoskeleton-plasmamembrane interface


Gene families : OG0000514 (Archaeplastida) Phylogenetic Tree(s): OG0000514_tree ,
OG_05_0000721 (LandPlants) Phylogenetic Tree(s): OG_05_0000721_tree ,
OG_06_0000977 (SeedPlants) Phylogenetic Tree(s): OG_06_0000977_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g078690.3.1
Cluster HCCA: Cluster_135

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01027683001 No alias Vesicle-associated protein 1-2 OS=Arabidopsis thaliana 0.03 Archaeplastida
MA_10429123g0020 No alias contact site protein (VAP27) of... 0.06 Archaeplastida
Mp3g04340.1 No alias contact site protein (VAP27) of... 0.02 Archaeplastida
Pp3c20_18330V3.1 No alias plant VAP homolog 12 0.03 Archaeplastida
Pp3c23_8610V3.1 No alias plant VAP homolog 12 0.03 Archaeplastida
Zm00001e040240_P001 No alias contact site protein (VAP27) of... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP Neighborhood
CC GO:0000808 origin recognition complex IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005664 nuclear origin of replication recognition complex IEP Neighborhood
CC GO:0005875 microtubule associated complex IEP Neighborhood
BP GO:0006260 DNA replication IEP Neighborhood
BP GO:0006643 membrane lipid metabolic process IEP Neighborhood
BP GO:0006644 phospholipid metabolic process IEP Neighborhood
BP GO:0006664 glycolipid metabolic process IEP Neighborhood
BP GO:0006996 organelle organization IEP Neighborhood
BP GO:0007010 cytoskeleton organization IEP Neighborhood
BP GO:0007017 microtubule-based process IEP Neighborhood
BP GO:0007051 spindle organization IEP Neighborhood
CC GO:0008287 protein serine/threonine phosphatase complex IEP Neighborhood
BP GO:0008654 phospholipid biosynthetic process IEP Neighborhood
MF GO:0008915 lipid-A-disaccharide synthase activity IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009245 lipid A biosynthetic process IEP Neighborhood
BP GO:0009247 glycolipid biosynthetic process IEP Neighborhood
BP GO:0009311 oligosaccharide metabolic process IEP Neighborhood
BP GO:0009312 oligosaccharide biosynthetic process IEP Neighborhood
BP GO:0016051 carbohydrate biosynthetic process IEP Neighborhood
MF GO:0016409 palmitoyltransferase activity IEP Neighborhood
BP GO:0016485 protein processing IEP Neighborhood
MF GO:0019208 phosphatase regulator activity IEP Neighborhood
MF GO:0019888 protein phosphatase regulator activity IEP Neighborhood
BP GO:0022402 cell cycle process IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
CC GO:0030289 protein phosphatase 4 complex IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0043085 positive regulation of catalytic activity IEP Neighborhood
BP GO:0044093 positive regulation of molecular function IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044430 cytoskeletal part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044454 nuclear chromosome part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0046467 membrane lipid biosynthetic process IEP Neighborhood
BP GO:0046493 lipid A metabolic process IEP Neighborhood
BP GO:0050790 regulation of catalytic activity IEP Neighborhood
BP GO:0051225 spindle assembly IEP Neighborhood
BP GO:0051604 protein maturation IEP Neighborhood
BP GO:0065009 regulation of molecular function IEP Neighborhood
CC GO:0070652 HAUS complex IEP Neighborhood
BP GO:0070925 organelle assembly IEP Neighborhood
BP GO:1901137 carbohydrate derivative biosynthetic process IEP Neighborhood
BP GO:1901269 lipooligosaccharide metabolic process IEP Neighborhood
BP GO:1901271 lipooligosaccharide biosynthetic process IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
CC GO:1903293 phosphatase complex IEP Neighborhood
BP GO:1903509 liposaccharide metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR000535 MSP_dom 7 111
No external refs found!