Solyc08g080290.4.1


Description : transcription factor (DREB)


Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000001 (LandPlants) Phylogenetic Tree(s): OG_05_0000001_tree ,
OG_06_0000070 (SeedPlants) Phylogenetic Tree(s): OG_06_0000070_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g080290.4.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00111p00113030 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
AT1G28370 ATERF11, ERF11 ERF domain protein 11 0.02 Archaeplastida
AT5G25190 No alias Integrase-type DNA-binding superfamily protein 0.01 Archaeplastida
GSVIVT01019519001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.01 Archaeplastida
GSVIVT01032983001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.01 Archaeplastida
GSVIVT01036389001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
LOC_Os02g52670.1 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_5805979g0010 No alias Ethylene-responsive transcription factor 1A... 0.06 Archaeplastida
MA_928517g0010 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 23 70
No external refs found!