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  5. AMTR_s00029p00199970

AMTR_s00029p00199970 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00029.279

Description : Luminal-binding protein OS=Solanum lycopersicum


Gene families : OG0000216 (Archaeplastida) Phylogenetic Tree(s): OG0000216_tree ,
OG_05_0002135 (LandPlants) Phylogenetic Tree(s): OG_05_0002135_tree ,
OG_06_0011317 (SeedPlants) Phylogenetic Tree(s): OG_06_0011317_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00029p00199970
Cluster HCCA: Cluster_59

Target Alias Description ECC score Gene Family Method Actions
AT1G09080 BIP3 Heat shock protein 70 (Hsp 70) family protein 0.03 Archaeplastida
AT1G16030 Hsp70b heat shock protein 70B 0.02 Archaeplastida
AT5G02490 No alias Heat shock protein 70 (Hsp 70) family protein 0.03 Archaeplastida
AT5G02500 AT-HSC70-1,... heat shock cognate protein 70-1 0.02 Archaeplastida
Cpa|evm.model.tig00000241.33 No alias External stimuli response.temperature.Hsp... 0.02 Archaeplastida
Cre08.g372100 No alias External stimuli response.temperature.Hsp... 0.01 Archaeplastida
GSVIVT01038580001 No alias External stimuli response.temperature.Hsp... 0.02 Archaeplastida
Gb_00216 No alias Heat shock 70 kDa protein BIP1 OS=Oryza sativa subsp.... 0.02 Archaeplastida
Gb_19273 No alias Heat shock 70 kDa protein OS=Glycine max... 0.03 Archaeplastida
LOC_Os05g30480.1 No alias Heat shock 70 kDa protein BIP3 OS=Oryza sativa subsp.... 0.02 Archaeplastida
LOC_Os06g10990.1 No alias Luminal-binding protein 4 OS=Nicotiana tabacum... 0.02 Archaeplastida
MA_5353g0010 No alias Luminal-binding protein OS=Solanum lycopersicum... 0.03 Archaeplastida
Mp2g08350.1 No alias chaperone (Hsp70) 0.03 Archaeplastida
Mp4g11410.1 No alias chaperone (Hsp70) 0.04 Archaeplastida
Pp3c3_26570V3.1 No alias heat shock cognate protein 70-1 0.02 Archaeplastida
Pp3c7_22170V3.1 No alias heat shock cognate protein 70-1 0.02 Archaeplastida
Smo443120 No alias External stimuli response.temperature.Hsp... 0.02 Archaeplastida
Smo446858 No alias External stimuli response.temperature.Hsp... 0.02 Archaeplastida
Solyc03g082920.4.1 No alias Luminal-binding protein 5 OS=Nicotiana tabacum... 0.03 Archaeplastida
Solyc11g066060.3.1 No alias chaperone (Hsp70) 0.02 Archaeplastida
Solyc11g066100.2.1 No alias chaperone (Hsp70) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP Neighborhood
MF GO:0004402 histone acetyltransferase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004560 alpha-L-fucosidase activity IEP Neighborhood
MF GO:0004645 phosphorylase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0006694 steroid biosynthetic process IEP Neighborhood
BP GO:0007155 cell adhesion IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008184 glycogen phosphorylase activity IEP Neighborhood
BP GO:0008202 steroid metabolic process IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
MF GO:0015928 fucosidase activity IEP Neighborhood
MF GO:0016160 amylase activity IEP Neighborhood
MF GO:0016161 beta-amylase activity IEP Neighborhood
MF GO:0016229 steroid dehydrogenase activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0016987 sigma factor activity IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
BP GO:0022610 biological adhesion IEP Neighborhood
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0034212 peptide N-acetyltransferase activity IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR013126 Hsp_70_fam 52 331
No external refs found!