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  5. AMTR_s00029p00201320

AMTR_s00029p00201320 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00029.283

No description available


Gene families : OG0026636 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0011400 (LandPlants) Phylogenetic Tree(s): OG_05_0011400_tree ,
OG_06_0011457 (SeedPlants) Phylogenetic Tree(s): OG_06_0011457_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00029p00201320
Cluster HCCA: Cluster_125


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0003713 transcription coactivator activity IEP Neighborhood
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP Neighborhood
MF GO:0004788 thiamine diphosphokinase activity IEP Neighborhood
CC GO:0005681 spliceosomal complex IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
BP GO:0009229 thiamine diphosphate biosynthetic process IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
MF GO:0016778 diphosphotransferase activity IEP Neighborhood
BP GO:0042357 thiamine diphosphate metabolic process IEP Neighborhood
BP GO:0044272 sulfur compound biosynthetic process IEP Neighborhood
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Neighborhood
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 18 66
No external refs found!