Description : component RPL4 of LSU proteome component
Gene families : OG0002429 (Archaeplastida) Phylogenetic Tree(s): OG0002429_tree ,
OG_05_0002329 (LandPlants) Phylogenetic Tree(s): OG_05_0002329_tree ,
OG_06_0002237 (SeedPlants) Phylogenetic Tree(s): OG_06_0002237_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Solyc09g007250.4.1 | |
Cluster | HCCA: Cluster_207 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00023p00210590 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.17 | Archaeplastida | |
AMTR_s00105p00023120 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.05 | Archaeplastida | |
AT3G09630 | No alias | Ribosomal protein L4/L1 family | 0.27 | Archaeplastida | |
AT5G02870 | No alias | Ribosomal protein L4/L1 family | 0.28 | Archaeplastida | |
Cpa|evm.model.tig00022075.53 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.24 | Archaeplastida | |
Cre09.g397697 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.14 | Archaeplastida | |
GSVIVT01025547001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.14 | Archaeplastida | |
Gb_21885 | No alias | component RPL4 of LSU proteome component | 0.04 | Archaeplastida | |
LOC_Os03g58204.1 | No alias | component RPL4 of LSU proteome component | 0.2 | Archaeplastida | |
LOC_Os07g08330.1 | No alias | component RPL4 of LSU proteome component | 0.22 | Archaeplastida | |
MA_9991417g0010 | No alias | component RPL4 of LSU proteome component | 0.11 | Archaeplastida | |
Mp4g20310.1 | No alias | component RPL4 of LSU proteome component | 0.26 | Archaeplastida | |
Pp3c20_19140V3.1 | No alias | Ribosomal protein L4/L1 family | 0.09 | Archaeplastida | |
Pp3c23_6290V3.1 | No alias | Ribosomal protein L4/L1 family | 0.07 | Archaeplastida | |
Pp3c23_9380V3.1 | No alias | Ribosomal protein L4/L1 family | 0.13 | Archaeplastida | |
Pp3c24_3760V3.1 | No alias | Ribosomal protein L4/L1 family | 0.14 | Archaeplastida | |
Smo166994 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.03 | Archaeplastida | |
Zm00001e005988_P001 | No alias | component RPL4 of LSU proteome component | 0.17 | Archaeplastida | |
Zm00001e011456_P002 | No alias | component RPL4 of LSU proteome component | 0.12 | Archaeplastida | |
Zm00001e011869_P001 | No alias | component RPL4 of LSU proteome component | 0.14 | Archaeplastida | |
Zm00001e032938_P001 | No alias | component RPL4 of LSU proteome component | 0.11 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
CC | GO:0005840 | ribosome | IEA | Interproscan |
BP | GO:0006412 | translation | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
MF | GO:0003723 | RNA binding | IEP | Neighborhood |
MF | GO:0003746 | translation elongation factor activity | IEP | Neighborhood |
MF | GO:0003922 | GMP synthase (glutamine-hydrolyzing) activity | IEP | Neighborhood |
MF | GO:0003924 | GTPase activity | IEP | Neighborhood |
MF | GO:0004298 | threonine-type endopeptidase activity | IEP | Neighborhood |
MF | GO:0005488 | binding | IEP | Neighborhood |
CC | GO:0005839 | proteasome core complex | IEP | Neighborhood |
CC | GO:0005852 | eukaryotic translation initiation factor 3 complex | IEP | Neighborhood |
BP | GO:0006177 | GMP biosynthetic process | IEP | Neighborhood |
BP | GO:0006413 | translational initiation | IEP | Neighborhood |
BP | GO:0006414 | translational elongation | IEP | Neighborhood |
MF | GO:0008135 | translation factor activity, RNA binding | IEP | Neighborhood |
BP | GO:0009116 | nucleoside metabolic process | IEP | Neighborhood |
BP | GO:0009119 | ribonucleoside metabolic process | IEP | Neighborhood |
BP | GO:0009163 | nucleoside biosynthetic process | IEP | Neighborhood |
CC | GO:0015934 | large ribosomal subunit | IEP | Neighborhood |
MF | GO:0016884 | carbon-nitrogen ligase activity, with glutamine as amido-N-donor | IEP | Neighborhood |
CC | GO:0019773 | proteasome core complex, alpha-subunit complex | IEP | Neighborhood |
MF | GO:0031369 | translation initiation factor binding | IEP | Neighborhood |
BP | GO:0042278 | purine nucleoside metabolic process | IEP | Neighborhood |
BP | GO:0042451 | purine nucleoside biosynthetic process | IEP | Neighborhood |
BP | GO:0042455 | ribonucleoside biosynthetic process | IEP | Neighborhood |
CC | GO:0044391 | ribosomal subunit | IEP | Neighborhood |
BP | GO:0046037 | GMP metabolic process | IEP | Neighborhood |
BP | GO:0046128 | purine ribonucleoside metabolic process | IEP | Neighborhood |
BP | GO:0046129 | purine ribonucleoside biosynthetic process | IEP | Neighborhood |
MF | GO:0070003 | threonine-type peptidase activity | IEP | Neighborhood |
MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
BP | GO:1901068 | guanosine-containing compound metabolic process | IEP | Neighborhood |
BP | GO:1901070 | guanosine-containing compound biosynthetic process | IEP | Neighborhood |
MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
BP | GO:1901657 | glycosyl compound metabolic process | IEP | Neighborhood |
BP | GO:1901659 | glycosyl compound biosynthetic process | IEP | Neighborhood |
No external refs found! |