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  5. AMTR_s00029p00211240

AMTR_s00029p00211240 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00029.307

Description : Protein biosynthesis.translation elongation.eEF1B eEF1A-GDP-recycling complex.eEF1B-beta/-delta component


Gene families : OG0001823 (Archaeplastida) Phylogenetic Tree(s): OG0001823_tree ,
OG_05_0001820 (LandPlants) Phylogenetic Tree(s): OG_05_0001820_tree ,
OG_06_0001499 (SeedPlants) Phylogenetic Tree(s): OG_06_0001499_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00029p00211240
Cluster HCCA: Cluster_164

Target Alias Description ECC score Gene Family Method Actions
AT5G19510 No alias Translation elongation factor EF1B/ribosomal protein S6... 0.06 Archaeplastida
GSVIVT01008526001 No alias Protein biosynthesis.translation elongation.eEF1B... 0.07 Archaeplastida
GSVIVT01037374001 No alias Protein biosynthesis.translation elongation.eEF1B... 0.04 Archaeplastida
Gb_07694 No alias component eEF1B-beta/-delta of eEF1B eEF1A-GDP-recycling complex 0.03 Archaeplastida
LOC_Os07g46750.1 No alias component eEF1B-beta/-delta of eEF1B eEF1A-GDP-recycling complex 0.06 Archaeplastida
MA_102713g0020 No alias component eEF1B-beta/-delta of eEF1B eEF1A-GDP-recycling complex 0.04 Archaeplastida
Mp8g01660.1 No alias component eEF1B-beta/-delta of eEF1B eEF1A-GDP-recycling complex 0.03 Archaeplastida
Solyc01g098000.3.1 No alias component eEF1B-beta/-delta of eEF1B eEF1A-GDP-recycling complex 0.04 Archaeplastida
Solyc07g016150.4.1 No alias component eEF1B-beta/-delta of eEF1B eEF1A-GDP-recycling complex 0.04 Archaeplastida
Solyc11g072190.2.1 No alias component eEF1B-beta/-delta of eEF1B eEF1A-GDP-recycling complex 0.06 Archaeplastida
Zm00001e035783_P001 No alias component eEF1B-beta/-delta of eEF1B eEF1A-GDP-recycling complex 0.07 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEA Interproscan
CC GO:0005853 eukaryotic translation elongation factor 1 complex IEA Interproscan
BP GO:0006414 translational elongation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003725 double-stranded RNA binding IEP Neighborhood
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0003995 acyl-CoA dehydrogenase activity IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004298 threonine-type endopeptidase activity IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
CC GO:0005622 intracellular IEP Neighborhood
CC GO:0005759 mitochondrial matrix IEP Neighborhood
CC GO:0005783 endoplasmic reticulum IEP Neighborhood
CC GO:0005839 proteasome core complex IEP Neighborhood
CC GO:0005840 ribosome IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Neighborhood
CC GO:0031974 membrane-enclosed lumen IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
CC GO:0043233 organelle lumen IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Neighborhood
CC GO:0044429 mitochondrial part IEP Neighborhood
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Neighborhood
MF GO:0070003 threonine-type peptidase activity IEP Neighborhood
CC GO:0070013 intracellular organelle lumen IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
BP GO:1901566 organonitrogen compound biosynthetic process IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR014038 EF1B_bsu/dsu_GNE 142 231
No external refs found!