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  5. Solyc09g010030.3.1

Solyc09g010030.3.1


Description : component mtRPL7/L12 of large ribosomal subunit proteome


Gene families : OG0000950 (Archaeplastida) Phylogenetic Tree(s): OG0000950_tree ,
OG_05_0000673 (LandPlants) Phylogenetic Tree(s): OG_05_0000673_tree ,
OG_06_0000509 (SeedPlants) Phylogenetic Tree(s): OG_06_0000509_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc09g010030.3.1
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
AT1G70190 No alias Ribosomal protein L7/L12, oligomerisation;Ribosomal... 0.03 Archaeplastida
AT4G36420 No alias Ribosomal protein L12 family protein 0.02 Archaeplastida
AT4G37660 No alias Ribosomal protein L12/ ATP-dependent Clp protease... 0.05 Archaeplastida
Gb_26365 No alias component mtRPL7/L12 of large ribosomal subunit proteome 0.03 Archaeplastida
LOC_Os02g10540.1 No alias component mtRPL7/L12 of large ribosomal subunit proteome 0.04 Archaeplastida
MA_137800g0010 No alias component mtRPL7/L12 of large ribosomal subunit proteome 0.06 Archaeplastida
Pp3c19_21200V3.1 No alias Ribosomal protein L7/L12, oligomerisation;Ribosomal... 0.06 Archaeplastida
Pp3c21_6760V3.1 No alias Ribosomal protein L12/ ATP-dependent Clp protease... 0.02 Archaeplastida
Zm00001e026468_P001 No alias component mtRPL7/L12 of large ribosomal subunit proteome 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP Neighborhood
MF GO:0004185 serine-type carboxypeptidase activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005840 ribosome IEP Neighborhood
MF GO:0008238 exopeptidase activity IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
MF GO:0070008 serine-type exopeptidase activity IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR013823 Ribosomal_L7/L12_C 127 190
No external refs found!