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  5. Solyc09g010460.3.1

Solyc09g010460.3.1


Description : component eIF3a of eIF3 mRNA-to-PIC binding complex


Gene families : OG0003561 (Archaeplastida) Phylogenetic Tree(s): OG0003561_tree ,
OG_05_0004232 (LandPlants) Phylogenetic Tree(s): OG_05_0004232_tree ,
OG_06_0004742 (SeedPlants) Phylogenetic Tree(s): OG_06_0004742_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc09g010460.3.1
Cluster HCCA: Cluster_158

Target Alias Description ECC score Gene Family Method Actions
AT4G11420 ATTIF3A1,... eukaryotic translation initiation factor 3A 0.02 Archaeplastida
Cpa|evm.model.tig00000194.37 No alias Protein biosynthesis.translation... 0.02 Archaeplastida
Cre13.g564250 No alias Protein biosynthesis.translation... 0.03 Archaeplastida
GSVIVT01031192001 No alias Protein biosynthesis.translation... 0.04 Archaeplastida
LOC_Os01g03070.1 No alias component eIF3a of eIF3 mRNA-to-PIC binding complex 0.08 Archaeplastida
MA_5693g0010 No alias component eIF3a of eIF3 mRNA-to-PIC binding complex 0.03 Archaeplastida
Pp3c3_10600V3.1 No alias eukaryotic translation initiation factor 3A 0.03 Archaeplastida
Pp3c4_26450V3.1 No alias eukaryotic translation initiation factor 3A 0.02 Archaeplastida
Zm00001e016603_P001 No alias component eIF3a of eIF3 mRNA-to-PIC binding complex 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001510 RNA methylation IEP Neighborhood
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0003916 DNA topoisomerase activity IEP Neighborhood
MF GO:0003917 DNA topoisomerase type I activity IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006265 DNA topological change IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0009451 RNA modification IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
BP GO:0016556 mRNA modification IEP Neighborhood
MF GO:0016853 isomerase activity IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
MF GO:0031369 translation initiation factor binding IEP Neighborhood
BP GO:0032259 methylation IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0043414 macromolecule methylation IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0051276 chromosome organization IEP Neighborhood
BP GO:0071103 DNA conformation change IEP Neighborhood
BP GO:0080009 mRNA methylation IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR000717 PCI_dom 373 510
No external refs found!